LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi7g1174	ATGCTGATAAACTTTGCTTCTGCTGGGAAGAGTCGGCAGTGGTTACTGATGTCCATGGATAAGCTTCACCACCACAAAGTTATTTTGACTCTCCTCCTCCTCATCCACTCATCAGATTACGCTCTTACAGACATGTATCTCATCAACTGTGGTTCAATCTCTGATACTGCAATCAGCAATCAGCACTTCGTGGGAGATGTGGACTCCGGCTCATCCGACTTTTTGGTAGGAGAAAGCAGTCGGGTCGTTGATGACAACCCAGCACCAGGGACACCTTTTCTCTATAGAACAGCTAGAATTTTCAGAAAACAATCTTCGTACAGGTTCCAAATCACCCAAAATGGCACCTACGTGGTACGCTTTCACTTCTACCCTTTCTCGACTCCAACAAATCTTGCCGACGCTCTCTTCAATGTTTCCGCTAATGGGTTTTCATTGCTGTCCAATTTCAGTGTCCAGAACACTAGTAACCCTCCTGTAATTAAGGAATTCGCAATCCCCATAGAGGTGGGAGAATTCATGATCTACTTCACACCTCAAAAATCATTTTTTGCTTTTGTAAACGCCATAGAAGCCTTTATTGCTCCGGAACGTTTCATTTCAGATGGAGTTAATCACGTTACTCCCGTAGGGCTTAAAGGCACTTACAATGGTTTGTTATCTCGGGCTTTTCATATAATCCATAGGATTAACGTTGGAGGCTTCACAATCACACCAAGTAATGATCTACTGTGGAGAAGTTGGACACCAGATGATGACTATCTATTTCTCCCAAATTCTGCAAATAACATTGAGTTCTACGGTGAGCTTAATTCCACGGCAGCTGCTGCAAAGTTGGCCCCAGATAATGTCTACAAGACTGCCAAAGAATTGAACATAAATCATAGCAGGTCATCAAATTTTTTCAATATGACCTGGGGTTTCGATGTGAATAAGAATTCTACCTACTTCGTGAGGGTGCATTTCTGTGACATAATTAGCCAAGATGTTGATGGTATTGTGTTCAATTTATCCATCTATAATCAGTTCATTGATAAGATCTATCCATATAACATTACTCATCCAGCAACTCCCTTTCACCGTGATTATGTGGTTGATTCTGATGATTCTGGATATGTGAATATCAGTGTAGGCCCTCGTAGCAAATCACTGAACCAAACTGCTTTTCTGAATGGACTTGAGATCATGGAGAAGATCGAGCGATCTGGTGCATACCCTGTGCCTAGCAATCCGAATAAGACTCTTGAGTCTCCGCCCAGCAATCCGAATAAGACCCTTAAGCCTGCGCCAAGCAAGCCAAAGAAGAACTTCATGTTTGCAATAGCTGGTTCTGTTGTTGGAGTGGCTTTTGTCCTTATGTTGATCGGAGTGTTCATGAAATGCAGGAAAGCAAGCCCTGCTGAGACCCGGGGTTGGTCTGTGCTTCTCTATGGAGGGAGATCTTTTTGGAAGACAAATGATAGAACTGCCAACAACTCCTCTGTTTCTAGTTTAAACCTCGGCTTAAAACTACCCTTTTCTGAAATACTGCATGCCACTAATAACTTCAACCCAAAAGTGATCGCCGGGGAGGGTGGGTTCGGGAAAGTTTATAGAGGAACTCTTCGAGATGGTAAGAAAGTGGCTGTCAAACGAAGTCAACCAGGGCAACGCCAGGGCTTTGCTGAATTTCAAGCTGAAATCAAGGTCTTATCCAAAATTCGCCACCGCCATCTGGTTTCCTTGATTGGATACTGTGATGAGAGGCATGAGATGATACTGGTTTATGAATTCATGGAAAACGGGACTCTCAGAGACCATCTATACAATTGGAATGAGGACTGCACCATATCGACTCCCCGATCACAACTGTCTTGGGAGCAAAGGCTTGAGATTTGCATTGGTTCAGCATGCGGTATTGATTACCTTCACACTGGTTCTGATGGGGGAATCATTCACCGGGATGTTAAATCAACAAACATTTTGCTTGATGAGAATTATGTGGCCAAGGTTTCTGATTTTGGTCTTTCAAAATCAGGCACTTCGGATAAATCCCATATCAGTACAAATGTAAAAGGCAGTTTTGGTTACCTTGATCCAGAATATTTCAGATGCTTGCATTTAACGGATAAATCAGATGTATACTCTTTTGGAGTGGTTCTTCTGGAAGTGCTTTGTGCTAGGCCGGCTATTAAAAGATCAGCTCCCAGTGGGGAAATGAATTTAGCTGAATGGGCCATGTCATGGCAAAAGAAAGGACAGCTCGAAAATATTGTTGATCCTTTTCTCCTGGGTAAAGTTAATCCTAACTCATTGCGGAAATTCGGAGAAATGGCAGAGAAGTGTTTGAAAGACTCGGGTGCTGATAGGCCTAATATGTGCAATGTCCTATGGGACTTGAAATATGCTCTTCAGCTCCAACGAGTTACAAGGCAGAGAGAAGGATATGGGGACAGCATAATAGATGCTTCATTGGAGTTCCCACTGCCTATTGTTCAGTACTCACCTTCTCCCAGCTTTCTGATTAAGGAACATGATATCCCCACGGAAAGTGGTGATGGTTCAGCGCCAACTGCTAGTCAAGTGTTCTCCCAACTGAGAATTGGTGACGCCAGATGA	2598	0.4326	MLINFASAGKSRQWLLMSMDKLHHHKVILTLLLLIHSSDYALTDMYLINCGSISDTAISNQHFVGDVDSGSSDFLVGESSRVVDDNPAPGTPFLYRTARIFRKQSSYRFQITQNGTYVVRFHFYPFSTPTNLADALFNVSANGFSLLSNFSVQNTSNPPVIKEFAIPIEVGEFMIYFTPQKSFFAFVNAIEAFIAPERFISDGVNHVTPVGLKGTYNGLLSRAFHIIHRINVGGFTITPSNDLLWRSWTPDDDYLFLPNSANNIEFYGELNSTAAAAKLAPDNVYKTAKELNINHSRSSNFFNMTWGFDVNKNSTYFVRVHFCDIISQDVDGIVFNLSIYNQFIDKIYPYNITHPATPFHRDYVVDSDDSGYVNISVGPRSKSLNQTAFLNGLEIMEKIERSGAYPVPSNPNKTLESPPSNPNKTLKPAPSKPKKNFMFAIAGSVVGVAFVLMLIGVFMKCRKASPAETRGWSVLLYGGRSFWKTNDRTANNSSVSSLNLGLKLPFSEILHATNNFNPKVIAGEGGFGKVYRGTLRDGKKVAVKRSQPGQRQGFAEFQAEIKVLSKIRHRHLVSLIGYCDERHEMILVYEFMENGTLRDHLYNWNEDCTISTPRSQLSWEQRLEICIGSACGIDYLHTGSDGGIIHRDVKSTNILLDENYVAKVSDFGLSKSGTSDKSHISTNVKGSFGYLDPEYFRCLHLTDKSDVYSFGVVLLEVLCARPAIKRSAPSGEMNLAEWAMSWQKKGQLENIVDPFLLGKVNPNSLRKFGEMAEKCLKDSGADRPNMCNVLWDLKYALQLQRVTRQREGYGDSIIDASLEFPLPIVQYSPSPSFLIKEHDIPTESGDGSAPTASQVFSQLRIGDAR*	866

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi7g1174	865	Gene3D	Transferase(Phosphotransferase) domain 1	592	813	-	-
	Vvi7g1174	865	FunFam	Putative receptor-like protein kinase	222	399	-	-
	Vvi7g1174	865	Pfam	Protein tyrosine and serine/threonine kinase	523	737	IPR001245	GO:0004672\|GO:0006468
	Vvi7g1174	865	FunFam	Receptor-like protein kinase FERONIA	592	814	-	-
	Vvi7g1174	865	CDD	STKc_IRAK	523	794	-	-
	Vvi7g1174	865	Pfam	Malectin-like domain	48	397	IPR024788	-
	Vvi7g1174	865	MobiDBLite	consensus disorder prediction	407	422	-	-
	Vvi7g1174	865	SUPERFAMILY	Protein kinase-like (PK-like)	492	793	IPR011009	-
	Vvi7g1174	865	ProSiteProfiles	Protein kinase domain profile.	516	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi7g1174	865	PANTHER	OS07G0166700 PROTEIN	503	800	IPR045272	GO:0004714\|GO:0006468
	Vvi7g1174	865	FunFam	Putative receptor-like protein kinase	45	196	-	-
	Vvi7g1174	865	MobiDBLite	consensus disorder prediction	404	430	-	-
	Vvi7g1174	865	Gene3D	-	223	400	-	-
	Vvi7g1174	865	Gene3D	-	43	194	-	-
	Vvi7g1174	865	FunFam	receptor-like protein kinase FERONIA	481	591	-	-
	Vvi7g1174	865	SMART	serkin_6	516	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi7g1174	865	Gene3D	Phosphorylase Kinase; domain 1	480	591	-	-
	Vvi7g1174	865	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	644	656	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi7g1174	Vvi-Chr7	16099447	16102044	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi7g1174	27	865	Receptor kinase-like Gene Family	AT2G23200	43.200	0.0	607

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vvi7g1174		Malectin_like	5.7e-28	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi7g1174	-		-	vvi:100254315	1744.17