LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi7g1170	ATGGAGAAGCTTGGCCACCAACACCTTCTTTTCACTCTCCTCCTCGTCCACTCCTCATCTAATCTGCTCCTTGCTTCAGGATACACTCTTCCAACTCAATACTTCATCAACTGTGGGTCAAGCTCTAACGCCACAGTCAACCGCCGGAACTTTGTTGGAGATGTGAATCCCGGCTCATCCTATTTCTCCGTAAGACCAAGCGATGATTTGAAGGATGGCAACCCAGAAAACGGTACATCTCCTCTCTACCAAACAGCTAGAATTTTCAGAAATGAATCTTGGTATGAGTTTCGAATCACTGAAAATGGCACCTACGTGGTACGCTTTCATTTCTACCCTTTCTTGACGCCAACAAATCTTACTGATGCTCTCTTCAATGTTTCGGTCACTGGGTATTCATTGCTGTCCAATTTCAGAGTCCAGAACAGAAGCAACTCTCCTGTAATTAAGGAATTTGCAATTCCCATTGATGTGGGAAACTTCACCATCCTCTTCACTCCTCAAAAATCATCTTTTGCATTTGTAAACGCGGTAGAAGCGTTTCTTGCCCCTGAAAAGTTCGTTTCAAATGGATCGCGTTACATTACTCCTGCCGGAAGTGAAGGTAACTACAGTGGTTTTGAATCTCGGGCTTTACATATAATCCATAGGATAAACGTTGGAGGCCCGACAATCCCACCAAATAATGATACACTGTGGAGAAGTTGGACACCCGACGATGATTATCTACTTCTCCCAGGTTCTGCCAAAAATAGTGAGGCCTCCAATAATACGCTCAACTACGATCCTTCGGAAGCTACTAACTATTCCGCCCCGGTTGATGTCTACAAGACTGCCAAAGAACTTAATAGAAGTTATAGCAGCTCATCATTCAATGTAACCTGGGGTTTCAGGGTGAATAAGAATTCTACCTACTTCGTGAGGGTGCATTTCTGTGACATAATTAGCCAAGATGCAGATGGTATTGTGTTCAATTTCTCCATTTATAGTCGGTTCATTGAACTTATATATTCATATGGCCCCACCACCCAGATCGGAACTCCATTTTACAAGGATTATGTGGTTGATTCCGATGATTCAAGTCTTATGAATATCAGTATAGGCCCTCGATCTGAGTCACCAAACAAGACTGCCTATCTGAATGGGCTCGAGATTATGGAGCTTATAACCAGGGAATCTGGCCCATTGCCTGCGCCAAGCAAGCCGAAGAAAAACCTTTTATTCGTTATAGTAGGTCCTGTTGTTGGCGTACTGGCTTGTCTCCTTATCCTGCTGGGGGTAATCTTGAAATGCAGGAAAGCAAACTCTGATGAAAGTGGAGAGTTTGGAGGAAGATACTTCAGTTGGATAACTGATAGAACTTCCGATAACTCCGTTGTTTCCAGTTTAAACCTGGGGTTAAAAATACCCCTTTCTGAAATCCGTCATGCAACTCATCGCTTTGACAAAAAATTGATGCTCGGTGAGGGTGGGTTCGGGAAAGTTTATAGAGGAACTCTTCGGGATGGGAAGAAAGTGGCTGTCAAACGAAGTCAACCAGGGCAAGGCCAGGGCTTGTACGAATTCCAAACTGAAATCATTGTCTTAACCAAAATTCGCCACCGCCACCTCGTGTCCTTGATTGGATATTGTGATGAGAGGCGTGAGATGATACTGGTTTACGAATTCATGGAAAATGGGACTTTACAAGACCTCCTATACGATTCCAATGAGGACTGCTCGACGTCATCTCCCCGATCAGAACTGTCTTGGGAGCAAAGGCTTGATATTTGCATTGCTTCAGCTATGGGTCTTGATTACCTTCACCGTGGCGCCGGAATCATTCACCGCGATGTGAAGTCAACGAATATCTTGCTTGATGAGAATTATGTGGCTAAAGTTGCGGATTTCGGTCTTTCAAAATCAGGCGATGCAGATCAAACCCACTTCAGTACTGACGTCAAAGGCAGCTTTGGTTACCTTGATCCCGAATATTTCAGATGCATGCAGTTAACAGATAAATCGGATGTATACTCCTTTGGAGTAGTTCTCCTGGAAGTGCTCTGCTCTAGGCCAGCTATTAAAAGGTCAGTTCCCAGGGAGGAAATGAATTTAGCTGAATGGGCGATTTCATGGCAAAAGAAAGGGGAGCTTGAAAAAATTGTGGATCCTTTTCTCGTGGGTAAAATCAATCCTAATTCATTGCGTAAGTTCGGAGAAACGGCAGAGAAGTGTTTGAGGGACTCTGGTGCTGATAGGCCTACCATGCGTGAGGTGGTATGGGACTTGCGATATGCACTTGATCTGCAACAAGCTAGGATTCCGAGAGAAGGATATGCCGACAGTATCACCGATGACTCTTTCGACTACTTGCCACTGTCTGGTGTTCCGTACGTGCCTTCTCCTAGCTTTCTTCTAATTGAGGAAGATGAAGTCCCCATAGAAGGTGATGATGGTTCAGAAGCAACTGCTAGTGAAGTGTTCTCCCAACTGGGGATCAGTGGTGCCAGATAA	2493	0.4456	MEKLGHQHLLFTLLLVHSSSNLLLASGYTLPTQYFINCGSSSNATVNRRNFVGDVNPGSSYFSVRPSDDLKDGNPENGTSPLYQTARIFRNESWYEFRITENGTYVVRFHFYPFLTPTNLTDALFNVSVTGYSLLSNFRVQNRSNSPVIKEFAIPIDVGNFTILFTPQKSSFAFVNAVEAFLAPEKFVSNGSRYITPAGSEGNYSGFESRALHIIHRINVGGPTIPPNNDTLWRSWTPDDDYLLLPGSAKNSEASNNTLNYDPSEATNYSAPVDVYKTAKELNRSYSSSSFNVTWGFRVNKNSTYFVRVHFCDIISQDADGIVFNFSIYSRFIELIYSYGPTTQIGTPFYKDYVVDSDDSSLMNISIGPRSESPNKTAYLNGLEIMELITRESGPLPAPSKPKKNLLFVIVGPVVGVLACLLILLGVILKCRKANSDESGEFGGRYFSWITDRTSDNSVVSSLNLGLKIPLSEIRHATHRFDKKLMLGEGGFGKVYRGTLRDGKKVAVKRSQPGQGQGLYEFQTEIIVLTKIRHRHLVSLIGYCDERREMILVYEFMENGTLQDLLYDSNEDCSTSSPRSELSWEQRLDICIASAMGLDYLHRGAGIIHRDVKSTNILLDENYVAKVADFGLSKSGDADQTHFSTDVKGSFGYLDPEYFRCMQLTDKSDVYSFGVVLLEVLCSRPAIKRSVPREEMNLAEWAISWQKKGELEKIVDPFLVGKINPNSLRKFGETAEKCLRDSGADRPTMREVVWDLRYALDLQQARIPREGYADSITDDSFDYLPLSGVPYVPSPSFLLIEEDEVPIEGDDGSEATASEVFSQLGISGAR*	831

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi7g1170	830	SUPERFAMILY	Protein kinase-like (PK-like)	468	754	IPR011009	-
	Vvi7g1170	830	ProSitePatterns	Protein kinases ATP-binding region signature.	487	509	IPR017441	GO:0005524
	Vvi7g1170	830	FunFam	Receptor-like protein kinase FERONIA	557	778	-	-
	Vvi7g1170	830	MobiDBLite	consensus disorder prediction	808	830	-	-
	Vvi7g1170	830	Gene3D	Phosphorylase Kinase; domain 1	447	556	-	-
	Vvi7g1170	830	Gene3D	-	31	182	-	-
	Vvi7g1170	830	Gene3D	-	211	388	-	-
	Vvi7g1170	830	ProSiteProfiles	Protein kinase domain profile.	481	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi7g1170	830	FunFam	Putative receptor-like protein kinase	210	389	-	-
	Vvi7g1170	830	Gene3D	Transferase(Phosphotransferase) domain 1	557	774	-	-
	Vvi7g1170	830	PANTHER	OS07G0166700 PROTEIN	468	763	IPR045272	GO:0004714\|GO:0006468
	Vvi7g1170	830	CDD	STKc_IRAK	487	753	-	-
	Vvi7g1170	830	FunFam	Putative receptor-like protein kinase	33	184	-	-
	Vvi7g1170	830	Pfam	Protein tyrosine and serine/threonine kinase	486	753	IPR001245	GO:0004672\|GO:0006468
	Vvi7g1170	830	Pfam	Malectin-like domain	36	387	IPR024788	-
	Vvi7g1170	830	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	607	619	IPR008271	GO:0004672\|GO:0006468
	Vvi7g1170	830	FunFam	receptor-like protein kinase FERONIA	448	556	-	-
	Vvi7g1170	830	SMART	serkin_6	481	759	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi7g1170	Vvi-Chr7	16064785	16067277	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi7g1170	4	767	Receptor kinase-like Gene Family	AT5G59700	45.558	0.0	612

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vvi7g1170		Malectin_like	4.5e-31	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi7g1170	-		-	vvi:100261177	1624.37