Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1168 ATGGAAGATATCTGGCTATACACATCTCTTACTGTCGTCTTTCTATTGTTTGCTTTCAAAGTCTTGCTTCACAGAAGAAGAAACCATGGAAACCTCCCACCAAGCCCGCCTGCTTTTCCTGTACTAGGTCATCTCCACCTGGTGAAATTACCTTTCCATCGAGCTCTACGGACTCTTTCTGAAAAGTATGGTCCCATATTCTCCCTCCGCCTCGGGTCTCGCCCAGTTGTTGTCGTCTCCTCTCCCTGCGCCGTCGAAGAATGCTTCACCAAGAACGACATCGTCCTCGCTAACCGTCCTCACTTCTTGAGCGGTAAGCACCTGGGCTACAACCACACCACTGTGGACGCCTTACCATATGGCGAAGACTGGCGCAACCTCCGCCGCCTCTGCTCAATCCAAATCCTCTCCTCCAATCGCCTTAACATGTTTCTAGGCATCCGCAGTGATGAAGTCAAGCTTCTGTTGCGCCGACTGTCTCAGGATTCCAGGGATAAGTTTGCAAAGGTAGAGTTGAAATCATTGTTTTCAAAGCTGACGTTTAATACTATAACGAGGACGATTGCAGGGAAGCGATACCATGGCGAAGAAGTGGGTATGGAGGAGGTTAAGCAGTTTCAGGAGATCATAGGGGAGATTTTTGAGTTGGGTGGGACTTCAAACCCGATGGACTACTTGCCCATATTGGAGTGGGTTGACTATGGGGGTTACAAGAAGAAGCTGATGAAGCTCGGTAGACAGACAGAGGCGATGCTGCAATGTTTAATTGATGAGCGTAGAAATAGCAAGAACAGGGGTTTAGAGGATAAAAGCACCACCATCGACCATCTGCTTTCATTGCAAAAATCAGAACCAGAGTACTACACTGATGAAATTATCAAAGGACTTATACTGGTTCTAATCCTAGGTGGAAGTGAGAGTACAGCGGTAACAATAGAATGGGCGATGGCTCTCCTACTCAATCATCCAGATGCGTTAAACAAAGCTAGAGAAGAGATAGACATTCACGTTGGACAAGGAAGATTGATGGAAGAATCAGATCTCTCCAAATTGGGGTACCTTCAAAATGTCATCTCTAAGACCCATAGATTGTACCCTGCAGCTCCACTCTTGCTACCCCATATGACATCAAGTCATTGTCAAGTGGGAGGATTTGATATACCAAAAGGCACCATGTTGTTGATTAATGCATGGGCTATTCACAGGGACCCTAAGGCATGGGATAACCCTACAAGTTTTAAGCCAGAGAGATTTAATAGCGAAGAAAATAATAATTACAAATTATTTCCATTTGGGCTTGGAATGAGGGCATGTCCTGGGAGTGGTCTAGCCAACAAGGTGATGGGTTTGACTTTAGGGTTATTAATTCAATGTTATGAGTGGAAAAGGGTTAGTAAGAAAGAAGTTGATATGGCGGAAGGGCTAGGACTCACCATGCCTAAGGCTGTACCATTGGAGGCCATGTGCAAAGCTCGTGATATCATCAAGATGGTTGTTTGA 1500 0.456 MEDIWLYTSLTVVFLLFAFKVLLHRRRNHGNLPPSPPAFPVLGHLHLVKLPFHRALRTLSEKYGPIFSLRLGSRPVVVVSSPCAVEECFTKNDIVLANRPHFLSGKHLGYNHTTVDALPYGEDWRNLRRLCSIQILSSNRLNMFLGIRSDEVKLLLRRLSQDSRDKFAKVELKSLFSKLTFNTITRTIAGKRYHGEEVGMEEVKQFQEIIGEIFELGGTSNPMDYLPILEWVDYGGYKKKLMKLGRQTEAMLQCLIDERRNSKNRGLEDKSTTIDHLLSLQKSEPEYYTDEIIKGLILVLILGGSESTAVTIEWAMALLLNHPDALNKAREEIDIHVGQGRLMEESDLSKLGYLQNVISKTHRLYPAAPLLLPHMTSSHCQVGGFDIPKGTMLLINAWAIHRDPKAWDNPTSFKPERFNSEENNNYKLFPFGLGMRACPGSGLANKVMGLTLGLLIQCYEWKRVSKKEVDMAEGLGLTMPKAVPLEAMCKARDIIKMVV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1168 499 CDD CYP81 64 485 - -
Vvi7g1168 499 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vvi7g1168 499 SUPERFAMILY Cytochrome P450 33 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 Gene3D Cytochrome P450 18 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 Pfam Cytochrome P450 33 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PANTHER CYTOCHROME P450 82C3-RELATED 11 492 - -
Vvi7g1168 499 FunFam Cytochrome P450 family protein 23 495 - -
Vvi7g1168 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1168 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1168 Vvi-Chr7 16055633 16057781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1168 10 492 Cytochrome P450 AT4G37370 53.593 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1168 K13260 - vvi:100247722 990.334