Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1167 ATGATGGCCAATATCAGTAGAGAGTTAGATGCCATCTTGCAAGGTTTGATTGATGAGCATAGAAGTAATAGTAAGAAGGGTTTGATGGGTAATAATACTATGATCGATCATTTGCTTTCCCTGCAAAAATCAGAGCCAGAGTACTACACAGATCAAATCATTAAAGGGGTAACAATGAACTTGGTTTTTGCCGGAACTGACACAGCGGCAGCAACAATGGAATGGGCGATGTCCCTTTTGCTTAACCATCCCGATGTGCTGAAAAAGGCTAAAGTAGAACTAGACACTTGTGTTGGACAAGAACGGTTGCTAGAAGAGGCTGATCTTCCCAAACTACACTACCTTCAAAATATCATTTCTGAAACCTTTAGACTCTGCCCACCTGCTCCACTTTGGCTGCCTCACATGTCATCTGAAAATTGCCAATTAGGGGGATTCGATATACCTAGAGACACAATGTTATTGGTCAATTCATGGACCCTTCACAGAGACCCTAAATTGTGGGATGATCCCACTAGCTTCAAGCCGGAGAGGTTTGAAGGTGGAGAAAGAGGTGAAACGTATAAGCTATTACCATTTGGAACCGGAAGGAGGGCATGTCCTGGGTCTGGTTTGGCCAATAAGGTGGTTGGCTTGACTTTAGGGTCACTGATTCAATGCTATGAATGGGAGAGGATCAGTGAGAAAAAAGTTGATATGATGGAAGGGAAAGGACTTACCATGCCCAAAATGGAGCCATTGGAAGCCATGTGTAGAGCATATGAAATAGTTAAAAAAGTCCTTCAGGATGAAGAGACAATGGTTAATTAA 810 0.4259 MMANISRELDAILQGLIDEHRSNSKKGLMGNNTMIDHLLSLQKSEPEYYTDQIIKGVTMNLVFAGTDTAAATMEWAMSLLLNHPDVLKKAKVELDTCVGQERLLEEADLPKLHYLQNIISETFRLCPPAPLWLPHMSSENCQLGGFDIPRDTMLLVNSWTLHRDPKLWDDPTSFKPERFEGGERGETYKLLPFGTGRRACPGSGLANKVVGLTLGSLIQCYEWERISEKKVDMMEGKGLTMPKMEPLEAMCRAYEIVKKVLQDEETMVN* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1167 269 SUPERFAMILY Cytochrome P450 4 250 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PANTHER CYTOCHROME P450 82C3-RELATED 2 252 - -
Vvi7g1167 269 Pfam Cytochrome P450 3 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 Gene3D Cytochrome P450 1 258 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS P450 superfamily signature 117 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS P450 superfamily signature 64 81 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS P450 superfamily signature 191 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS E-class P450 group I signature 116 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS E-class P450 group I signature 53 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS E-class P450 group I signature 157 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS E-class P450 group I signature 73 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS E-class P450 group I signature 200 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 PRINTS E-class P450 group I signature 190 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1167 269 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 193 202 IPR017972 GO:0005506|GO:0016705
Vvi7g1167 269 FunFam Cytochrome P450 81D1 34 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1167 Vvi-Chr7 16040414 16041305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1167 2 263 Cytochrome P450 AT4G37360 61.450 2.10e-115 338