Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1163 ATGGATGTGTCTTCCCTTCACACATCGCTCTCTCTTCTCTTCGTGTTTCTCTTGCTTGCTTTCGGAATCTTCTTCCCAAGAAGACGAAGATATGGGAATCTCCCACCCAGCCCGCCTGCAGTTCCGATTATAGGTCATCTCCACCTCCTCAAACAACCGGTTCATCGATCTCTACAACTCCTTTCACAAAAGTACGGTCCAATCTTCTCCCTCCGATTAGGATCCCAGCTCGCGGTCATCGTTTCCTCTCCCTCCGCCGTCGAAGAATGCTTCACCAAGAACGACGTCGTCTTGGCCAACCGCCCTCGCTTTGCGTCCGGCAAGTACGTGGGGTACAACTACACCACCATTGGCGCGGCATCATACGGCGACCACTGGCGCAACCTCCGTCGCCTCAGCGCCCTGGAAATCTTCTCCTCCAATCGCCTCAACATGTTTCTAGGCATCCGCAGGGATGAAGTCAAGCGTCTACTCCTCCGACTGGCTCGAGATTCGAGGGAGGGTTTTGCAAAGGTAGAGATGAGACCCATGCTTACAGAGCTAACCTTTAATATTATAACGAGGATGGTTGCAGGAAAGAGATACTACGGAGAAGACGTGGAATATACGGAGGCTAAACGTTTTCGGGAGATTATCAGCCAGCTTTTCATACTGGGCGGGGCATCATCAAATCCAGCAGATTTTTTGCCCATATTGCGATGGATTGGGCTCGGATATCATGAGAAGAAGCTAAAGAAGATCGTGAGAGAGACAAGGGCGATCTTGCAGGGTTTGATTGATGAGCATAGAAGTGGTAATGACAAGGGTTCGGTGGATAATAATTCTATGATCGACCATCTGTTATCCTTGCAAAAAACAGAACCAGAGTACTACACAGATGACATTATTAAAGGGCTTGTACAGGTCTTAATTCTTGCTGGAACCGACACTTCAGCAGCAACAATGGAATGGGCAATGACCCTTCTCCTCAATCATCCGGATGTTTTGGAGAAAGCTAAAGCAGAGTTGGATATGCACGTTGGAAAGGACCGCTTGATAGAAGAATCTGATCTTCCCAAACTGCGGTACCTTCGAAGTATCATTTCTGAGACTTTGAGAGTATTTCCTGTGGCCCCTCTGTTACTGCCCCATATGTCCTCAGATGACTGTCAAATAGGGGGTTTTGATATACCACGAGGCACATTATTACTGGTAAATGTATGGGCCCTTCACAGAGACCCTCAGGTGTGGGAAGATCCTACAAGTTTCAAACCTGAAAGGTTTGAAAATGGAGAACGTGAGAATTACAAACTAGTACCATTTGGAATAGGAAGAAGAGCCTGTCCTGGAGCTGGCCTAGCTCAGCGAGTGGTGGGTTTGGCTTTGGGGTCGTTGATTCAGTGCTATGACTGGAAGAAGATTAGCAACACCGCTATTGACACCATTGAAGGGAAAGGGCTGACCATGCCCAAACTGCAGCCATTGGAAGCCATGTGTAAGGCACGTGAGATTATAAACGAGGTTCACTTGAACTAG 1515 0.4805 MDVSSLHTSLSLLFVFLLLAFGIFFPRRRRYGNLPPSPPAVPIIGHLHLLKQPVHRSLQLLSQKYGPIFSLRLGSQLAVIVSSPSAVEECFTKNDVVLANRPRFASGKYVGYNYTTIGAASYGDHWRNLRRLSALEIFSSNRLNMFLGIRRDEVKRLLLRLARDSREGFAKVEMRPMLTELTFNIITRMVAGKRYYGEDVEYTEAKRFREIISQLFILGGASSNPADFLPILRWIGLGYHEKKLKKIVRETRAILQGLIDEHRSGNDKGSVDNNSMIDHLLSLQKTEPEYYTDDIIKGLVQVLILAGTDTSAATMEWAMTLLLNHPDVLEKAKAELDMHVGKDRLIEESDLPKLRYLRSIISETLRVFPVAPLLLPHMSSDDCQIGGFDIPRGTLLLVNVWALHRDPQVWEDPTSFKPERFENGERENYKLVPFGIGRRACPGAGLAQRVVGLALGSLIQCYDWKKISNTAIDTIEGKGLTMPKLQPLEAMCKAREIINEVHLN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1163 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 FunFam Cytochrome P450 family protein 25 498 - -
Vvi7g1163 504 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 Gene3D Cytochrome P450 27 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vvi7g1163 504 CDD CYP81 66 488 - -
Vvi7g1163 504 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1163 504 PANTHER CYTOCHROME P450 82C3-RELATED 14 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1163 Vvi-Chr7 16015589 16017287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1163 10 500 Cytochrome P450 AT4G37370 57.515 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1163 K13260 - vvi:100249138 987.252