Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1162 ATGTTTCACCAAGAGCGACATCATTTTTGCCAACCGCCCTTGCTTCTTGTTCGGCAAGACTACAACTACACTACCATTGCTTCAGCACCATATGGTGAACACTGGAGCAATCTCCGCCGCCGCCTCAGCACACTGGAAATCTTCTCCACAAATCGCCTTAACATGTTTCTGGGTATCCGCTGGGATGAAATCAAGCTTCTATTGCGCCAATTGTCTCTGAATTCAAGGGATCATTTTGCAAGGGTAGAGTTGAGACCAATGTTTATAGAGCTAACATGTAATATTATAATGCGAATGGTTGCAGGAAATCGGTATTATGGGGAAGCAGTGGATTTCGAGGAAGCCAAACTTTTTCGGGAAGTAATGAGAGGGATTTTCGAATTGGCTGGAACACTGGCGCACCCTCCTCCGCCTCGTCAGCACACTTGA 429 0.4639 MFHQERHHFCQPPLLLVRQDYNYTTIASAPYGEHWSNLRRRLSTLEIFSTNRLNMFLGIRWDEIKLLLRQLSLNSRDHFARVELRPMFIELTCNIIMRMVAGNRYYGEAVDFEEAKLFREVMRGIFELAGTLAHPPPPRQHT* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1162 142 SUPERFAMILY Cytochrome P450 5 132 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1162 142 PANTHER CYTOCHROME P450 82C3-RELATED 20 133 - -
Vvi7g1162 142 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1162 Vvi-Chr7 16010958 16011386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1162 11 131 Cytochrome P450 AT2G23220 51.220 7.11e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1162 K13260 - vvi:100261095 175.637