Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1159 ATGATCGATCATCTGCTTTCACTGCAAAAATCAGAGCCAGAATATTACACAGACGAAATCATAAAAGGGCTTGCACTGATCTTAATTTTTGCTGGTACTGACACTACTGCGACGACAATAGAATGGGCTATGTCTCTTCTACTCAATCATCCTGATGTTTTGAAGAAAGCTAGAGCAGAATTGGACACTCATGTTGGAAAAGATCGTTTGACGGAAGAATCAGATTTCCCCAAATTACAATATCTTCGAAGTATCATTTCTGAAACCTTAAGATTGTTTCCGGCAACCCCACTTTTGATGCCACATATTTCTTCAGACAATTGCCAAATAGGAGGATTTGATATACCAAGAGGCACAATATTATTGGTCAATGCTTGGGCCATTCACAGAGACCCTAAGTCGTGGAAAGATCCTACAAGTTTCAAGCCAGAGAGGTTCGAAAATGAGGAAGGTGAGGCATACAAGCTATTGCCATTTGGCTTAGGAAGAAGGGCTTGCCCCGGTGCTGGCCTGGCTAATCGAGTGATAGGTTTGACTTTGGGGTTATTGATTCAGTGTTATGAGTTGGAGAGAGCTAGCGAGAAGGAGGTTGACATGGCTGAAGGGAAAGGAGTCACCATGCCCAAATTGGAGCCATTGGAAGCCATGTGTAAAGCTCGTGCTATTATCAGAAAGGTATTATAA 684 0.424 MIDHLLSLQKSEPEYYTDEIIKGLALILIFAGTDTTATTIEWAMSLLLNHPDVLKKARAELDTHVGKDRLTEESDFPKLQYLRSIISETLRLFPATPLLMPHISSDNCQIGGFDIPRGTILLVNAWAIHRDPKSWKDPTSFKPERFENEEGEAYKLLPFGLGRRACPGAGLANRVIGLTLGLLIQCYELERASEKEVDMAEGKGVTMPKLEPLEAMCKARAIIRKVL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1159 227 SUPERFAMILY Cytochrome P450 1 220 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 159 168 IPR017972 GO:0005506|GO:0016705
Vvi7g1159 227 Pfam Cytochrome P450 2 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 FunFam Cytochrome P450 81D1 1 223 - -
Vvi7g1159 227 Gene3D Cytochrome P450 1 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS P450 superfamily signature 157 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS E-class P450 group I signature 83 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS E-class P450 group I signature 166 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS E-class P450 group I signature 124 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PRINTS E-class P450 group I signature 156 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1159 227 PANTHER CYTOCHROME P450 82C3-RELATED 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1159 Vvi-Chr7 16000969 16001954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1159 1 227 Cytochrome P450 AT4G37360 66.520 3.87e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1159 K13260 - vvi:100261095 437.187