Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1155 ATGTTTGTCATCAACACAACCATGGAAATTACATGGCTAAGCACATCTCTATGTCTTCTCTTTCTCTCGTTTGCTTTCAATATCTTCCTCCAAAGAAGAAGAATACATCCCCACCTCCCACCAAGCCCGCCTGCTATTCCGATTCTTGGTCACCTCCATCTCCTCCTTAAACCACCAATTCATCGGCAATTACAAAGTCTTTCTAAAAAATATGGTCCTATCTTCTCCCTTCGCTTCGGATCCAGTCCTGTTGTTATCATATCCTCTCCGTCCACTGTTGAAGAATGTTTCACTAAGAACGACATCATTTTTGCCAACCGGCCTCGCTGGCTGATCGGCAAGTACATAGGCTACAACTACACCACTATTGCTTCAGCATCATATGGCGAACACTGGCGCAATCTCCGCCGCCTCAGCGCACTGGAAATCTTCTCCTCAAATCGCCTCAACATGTTTCTAGGCACTCGCAGGGATGAAATCAAGATTTTACTACACCGATTGTCTCAGAATTCAAGGGACAATTTTGCAAGGGTAGAGTTGAGACCAATGTTTACAGAGCTAACATGTAATATTATAATGAGAATGGTTACAGGAAAGAGGTACTATGGGGAAGATGTGGATAGTGAGGAAGCCAAGCGTTTTCAGAAAATAATGAGAGGGATTTTTGAACTGGCTGGGGCATCAAATCCAGGAGATTTTTTGCCTTTACTACGGTGGGTTGATTTTGGGGGTTATGAGAAGAAGTTGGTGAAGCTCAATAGAGAGAAAGACGTGATCTTCCAAGGTCTTATTGACGAGCATCGAAGTCCTGACCAGGGTCTAGTGAATAAAAACAGCATGATCGATCATCTGCTTTCACTGCAAAAATCAGAACCAGAATATTACACAGACGAAATCATAAAAGGGCTTGCACTGATCTTAACTTTTGCTGGTACTGACACTACTGCGACGACAATAGAATGGGCTATGTCTCTTCTACTCAATCATCCTGATGTTCTGAAGAAAGCTAGAGCAGAATTGGACACTCATGTTGGAAAAGATCGTTTGATGGAAGAATCAGACTTCCCCAAATTACAATATCTTCGAAGTATCATTTCTGAGACGTTAAGATTGTTTCCGGCTACCCCACTCTTGATACCACATATTTCTTCAGACAATTGCCAAATTGGAGGATATGATATCCCAAGAGGCACAATATTATTGGTCAATGCTTGGGCCATTCACAGAGACCCTAAGTCGTGGAAAGATGCTACAAGTTTCAAGCCAGAGAGGTTCGAAAATGGGGAAAGTGAGGCATACAAGCTATTGCCATTTGGCTTCGGAAGAAGGGCTTGCCCTGGTGCTGGCCTGGCTAATCGAGTGATAGGTTTGACTTTGGGGTTATTGATTCAGTGTTATGAGTGGGAGAGAGTTAGTGAGAAGGAAGTTGACATGGCTGAAGGGAAAGGAGTCACCATGCCCAAATTAGAGCCATTGGAAGCCATGTGTAAAGCTCGTGCTATTATCAGAAAGGTATTATAA 1521 0.432 MFVINTTMEITWLSTSLCLLFLSFAFNIFLQRRRIHPHLPPSPPAIPILGHLHLLLKPPIHRQLQSLSKKYGPIFSLRFGSSPVVIISSPSTVEECFTKNDIIFANRPRWLIGKYIGYNYTTIASASYGEHWRNLRRLSALEIFSSNRLNMFLGTRRDEIKILLHRLSQNSRDNFARVELRPMFTELTCNIIMRMVTGKRYYGEDVDSEEAKRFQKIMRGIFELAGASNPGDFLPLLRWVDFGGYEKKLVKLNREKDVIFQGLIDEHRSPDQGLVNKNSMIDHLLSLQKSEPEYYTDEIIKGLALILTFAGTDTTATTIEWAMSLLLNHPDVLKKARAELDTHVGKDRLMEESDFPKLQYLRSIISETLRLFPATPLLIPHISSDNCQIGGYDIPRGTILLVNAWAIHRDPKSWKDATSFKPERFENGESEAYKLLPFGFGRRACPGAGLANRVIGLTLGLLIQCYEWERVSEKEVDMAEGKGVTMPKLEPLEAMCKARAIIRKVL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1155 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vvi7g1155 506 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 CDD CYP81 72 492 - -
Vvi7g1155 506 SUPERFAMILY Cytochrome P450 40 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 Gene3D Cytochrome P450 26 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1155 506 PANTHER CYTOCHROME P450 82C3-RELATED 19 499 - -
Vvi7g1155 506 FunFam Cytochrome P450 family protein 30 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1155 Vvi-Chr7 15965540 15967183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1155 8 506 Cytochrome P450 AT4G37370 55.666 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1155 K13260 - vvi:100261095 971.844