Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1152 ATGATTGACCATCTCCTTTCCCTGCAAAAATCCCAACCAGAGTACTACACAGATGACATCATCAAAGGGCTTATTATGGTCCTGATTCTCGCCGGAACTGAGACATCTGCAACAACGACGGAATGGGCAATGGCTCTTTTGCTCAACCATCCAAATTCGTTGAAAAAAGCAATCGCAGAAATAGACGATCGAGTCGGCCAAGAACGAATAATGGACGAAACCGATCTCCCCAACCTGCCTTACCTTCAAAATATCGTAAGGGAGACCCTGAGACTGTACCCACCAGGGCCATTGCTAGTGCCCCATGTATCCTCTGAGGAATGTGAAATAGGGGGATACCATATACCAAAACACACAATGGTGATGGTCAATGCATGGGCCATTCAAAGGGACCCTAAACTATGGCCCGATGCCACAAGTTTTCGGCCAGAGAGATTTGAGACTGGGAAAGCAGAGACTTACAAGTTCCTACCATATGGAGTAGGAAGGAGAGCTTGTCCTGGAGCAAGCATGGCGAACCGACTGATTGGACTGACGTTAGGGACCTTGATTCAGTGTTATAGCTGGGAGAGGGTTAGCGACAAGGAAGTTGATATGAGTGGGGCCGAAGGACTCACCATGCCAAAGAAGACTCCGCTGGAGGCCATGTGTAAACCACGTGATGTCCTCAAAAAGGTTTTTGAAGGGTATAAAACTGTCTTGTAG 705 0.4766 MIDHLLSLQKSQPEYYTDDIIKGLIMVLILAGTETSATTTEWAMALLLNHPNSLKKAIAEIDDRVGQERIMDETDLPNLPYLQNIVRETLRLYPPGPLLVPHVSSEECEIGGYHIPKHTMVMVNAWAIQRDPKLWPDATSFRPERFETGKAETYKFLPYGVGRRACPGASMANRLIGLTLGTLIQCYSWERVSDKEVDMSGAEGLTMPKKTPLEAMCKPRDVLKKVFEGYKTVL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1152 234 SUPERFAMILY Cytochrome P450 1 220 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS E-class P450 group I signature 83 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS E-class P450 group I signature 124 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS E-class P450 group I signature 156 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS E-class P450 group I signature 166 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS P450 superfamily signature 157 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 Gene3D Cytochrome P450 1 224 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1152 234 PANTHER CYTOCHROME P450 82C3-RELATED 1 220 - -
Vvi7g1152 234 FunFam Cytochrome P450 81D1 1 223 - -
Vvi7g1152 234 Pfam Cytochrome P450 2 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1152 Vvi-Chr7 15953091 15953886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1152 1 228 Cytochrome P450 AT4G37340 60.699 2.86e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1152 K13260 - vvi:100243905 479.944