Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1130 ATGGCCATCCTCGCCGGACTTCATCACCGCCGGCCAATCCTGTCAAATTCAGTACAAACGAATCGCAAGACCACTGTATGCTATCTCTTCTCCTCACGTTCGAGTTGTAGAATTCAGTGGTTCAGTAGCAGTACCGAGTTCGGCGGAGAAAACGCATACGACCTCTTAGGGGTTTCAGAAAGCAGCTCATTCGACGAAATCAAAGCTTCGTTTAGGAAATTGGCTAAAGAGACTCACCCGGACCTCGCGCATTCAAATAACGATTCCACTGCTTCACAGCGATTCATTCAAATCCTGGCAGCTTATGAGATTCTTTCAGATACTGAGAAAAGGGCCCATTATGACAGGGATCTATTATCTCAGAGAAGGCTAGTGCAGAAATATTCTAGACAGGGTTCAACTTTATATACATATGAATCCCATATTATGAAGAGGCAGATGGAAGTTGTTGAATGGTTGAAGTGGTACAGGTTTGCCATAAATGAGATATTGTCTGAGAAGAAGGTGGTAGCTGGATCAGGCTATTTTGATGTACTTGAAGGGGAATTTTATTCAGCCATTCATGCAGCATATTATGGCCCTTTAATTGAGTCTATGGACCTTCTTCCTGACCGTTTCGAAGCTGAGGAGAGGTCTGAATATGAAACTCCTGAGGTGCTGCACCTGGTTTCAGGTCGTGATCTTTTTGGGATGGTATGCATTGTTAAAAAACTTCCTGAATTATCTCATGCCTGCAATGAAAAGTTGACTTCTTTTGCATCTTTGGGTTTGGATATGCGTCAGTTTGTTGGGGATGCAAGCATGAGCATGAATTCTGATGCAGCAGATGACACAGGAACTTCTCAGATGCAAGCCAAAAATATTAAATATCATACATCAGATGCATACAAAGATTTAGAATTGCATGTATCTGGGAAGGTGGTTGCTTTAGCCACTAGAATCCCTCCTAAAAGTTACTATGATGGAATACAAAATGAAGATTCTCAAGATCAGATACAAGTTTTCCTTAGCTCAGATGAAGGCTCAATGCATGTTAGCCATGGGATTTCTAAGGATTCCCTTCTGGGTGGTGCAGTTGGATTGCGGATTCCATTGGGGACAATAACCGGGCTTGGAACCAACCCAGAAGAAGGGTCCTGTTTCGTCTATGATAGTAGCGGTACAAAAACCCATGCGATTATAAAACATAGAACATTGATGGTAAAGCACATGCACTGGTATCAGGTTGGAGATGAGGTTTCTGTCTGTGAGTGTAGATGCAGTAGAGCACGTTTACCACCCAGCAAATATTGGCTGTTTGAGCCTCGCTGTGGAATGCATGATATTGGTGGTTGGTATGTTGAAACTTTTGGCAAAGATAAGAAAGGATGGACAATCCCTTCCCAAAGATATTGGGATGGATTTGATGCACATGAACAATATGAAAAGGTCCATCCAGCTATGTATTTGCTTGCTCTTGCATATAGAACTCTAGATCTTGAAGATGCCAGAAGAAGGAAAAGGACAGTTAGGAATATTGTGGAAGGCAAACTGTTTAGAATTCTCAGTTGGTGCAAGAAAATGATTTAG 1569 0.4219 MAILAGLHHRRPILSNSVQTNRKTTVCYLFSSRSSCRIQWFSSSTEFGGENAYDLLGVSESSSFDEIKASFRKLAKETHPDLAHSNNDSTASQRFIQILAAYEILSDTEKRAHYDRDLLSQRRLVQKYSRQGSTLYTYESHIMKRQMEVVEWLKWYRFAINEILSEKKVVAGSGYFDVLEGEFYSAIHAAYYGPLIESMDLLPDRFEAEERSEYETPEVLHLVSGRDLFGMVCIVKKLPELSHACNEKLTSFASLGLDMRQFVGDASMSMNSDAADDTGTSQMQAKNIKYHTSDAYKDLELHVSGKVVALATRIPPKSYYDGIQNEDSQDQIQVFLSSDEGSMHVSHGISKDSLLGGAVGLRIPLGTITGLGTNPEEGSCFVYDSSGTKTHAIIKHRTLMVKHMHWYQVGDEVSVCECRCSRARLPPSKYWLFEPRCGMHDIGGWYVETFGKDKKGWTIPSQRYWDGFDAHEQYEKVHPAMYLLALAYRTLDLEDARRRKRTVRNIVEGKLFRILSWCKKMI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1130 522 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 521 - -
Vvi7g1130 522 Pfam DnaJ domain 51 115 IPR001623 -
Vvi7g1130 522 Gene3D DnaJ domain 39 140 IPR036869 -
Vvi7g1130 522 CDD DnaJ 51 107 IPR001623 -
Vvi7g1130 522 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Vvi7g1130 522 PRINTS DnaJ domain signature 53 71 IPR001623 -
Vvi7g1130 522 PRINTS DnaJ domain signature 90 110 IPR001623 -
Vvi7g1130 522 PRINTS DnaJ domain signature 71 86 IPR001623 -
Vvi7g1130 522 SUPERFAMILY Chaperone J-domain 50 120 IPR036869 -
Vvi7g1130 522 ProSiteProfiles dnaJ domain profile. 51 118 IPR001623 -
Vvi7g1130 522 SMART dnaj_3 50 110 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1130 Vvi-Chr7 15715343 15720091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1130 53 115 C2H2 Transcription Factor Family AT1G74250 43.939 3.45e-09 57.4