Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1112 ATGGGAGAGGAGGGTGGCGGTGGCGGTGGCGGAGGGGGCAGGGTGGTGGTAGTGGTGAGGGAGTTCCACCCTGAAAAGGATTGCAGGAGAGTGGAGGAAGTGGAGAGGAGGTGTGAGGTTGGACCCAGTGGGGAGCTCTCCCTCTTCACGGACCTGTTGGGCGACCCAATTTGCAGGGTTCGCCATTCTCCCGCCTTCCGCATGCTGGTAGCAGAGATGGTGGGCGAAGAGAATGAGGAAGCGAAGGAGATAGTAGGGATGATAAGGGGTTGCATCAAAACTGTTACATGTGGGAAGAAACTCTCCAGAAATGGAAGGACCTCCAATGATCCTACCAAACCCCTTCCTGTTTACACCAAACTCGCCTATATCTTAGGCCTTCGCGTCTCTCCTTCTCACCGGAGAATGGGTATTGGGTTGAAGCTGGTTTGTAGGATGGAGGAGTGGTTTAGAGATAATGGCGCTGAATATTCCTATATAGCCACTGAAAACGACAATCAAGCTTCCGTTAACCTCTTCACCGACAAATGCGGCTACTCCAAGTTCCGTACGCCTTCCATCCTGGTGAACCCCGTCTTTGCTCACACAGTCCGTCTTCCTAAACGAGTCCACATCTTCAAGCTCTCCCCCTCCGACGCCGAGGCGCTCTACCGCCGTCGCTTCTCAACCACAGAGTTTTTTCCCCGTGACATTGACTCCGTCCTCAACAATAAGCTCAATCTCGGCACCTTCGTGGCCGTTTTTTCCGAGTCAAACCCCACCGAATCATGGCCCGGATCGGACTCGTTCCTGGCGGACCCGCCCGAGTCGTGGGCGGTTCTCAGCGTCTGGAACTGCAAGGACGTGTTCACGCTAGAGGTGCGTGGCGCGTCGCGCGTGAAACGGGGGTTCGCGAAAACGACTCGTTTGGTGGACAGGGCGCTCCCGTGGCTGCAGTTGCCGTCAGTGCCGGAGGTGTTCAGGCCATTCGGACTACACTTCATGTATGGGCTGGGGGGAGAAGGCCCACGCGCGGTGAAGTTGGTGAAGGCGCTGTGTGGGTACGCGCACAACCTGGCTAAGGAACGTGGGTGCGGGGTGGTGGCCACGGAGGTGTCCAGCCGCGAACCTCTCAGATTAGGAATCCCACACTGGAAGAGGCTATCCTGCGCCGAGGACCTATGGTGCATGAAGAGGCTCGGGGAAGACTACAGCGACGGTTCGGTCGGTGACTGGACCAAATCACACCCTGGCCCTTCCATTTTTGTTGACCCCAGAGAGTTCTAA 1266 0.5687 MGEEGGGGGGGGGRVVVVVREFHPEKDCRRVEEVERRCEVGPSGELSLFTDLLGDPICRVRHSPAFRMLVAEMVGEENEEAKEIVGMIRGCIKTVTCGKKLSRNGRTSNDPTKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVCRMEEWFRDNGAEYSYIATENDNQASVNLFTDKCGYSKFRTPSILVNPVFAHTVRLPKRVHIFKLSPSDAEALYRRRFSTTEFFPRDIDSVLNNKLNLGTFVAVFSESNPTESWPGSDSFLADPPESWAVLSVWNCKDVFTLEVRGASRVKRGFAKTTRLVDRALPWLQLPSVPEVFRPFGLHFMYGLGGEGPRAVKLVKALCGYAHNLAKERGCGVVATEVSSREPLRLGIPHWKRLSCAEDLWCMKRLGEDYSDGSVGDWTKSHPGPSIFVDPREF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1112 421 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 421 - -
Vvi7g1112 421 CDD NAT_SF 113 157 - -
Vvi7g1112 421 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 204 IPR000182 GO:0016747
Vvi7g1112 421 FunFam Probable N-acetyltransferase HLS1-like 26 186 - -
Vvi7g1112 421 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 184 IPR016181 -
Vvi7g1112 421 Gene3D - 19 187 - -
Vvi7g1112 421 Pfam Acetyltransferase (GNAT) family 67 179 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1112 Vvi-Chr7 15521919 15523577 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi7g1112 Acetyltransf_1 2.9e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1112 - - vvi:100242159 838.95