Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1108 ATGAGACTTGTTTGTTTCTACCTCTTTTTCGTTCTTCTTCTATCATTCTCACTTCATACTGCTGCTACTGCTCTTAGCCAAAGAAGAATTCTGCATCAGCCCTTATTTCCAGACAGTTCGCCGCCCCCTGGTGCAGATTCTCCGCCGCCTCCACCGCCTGACAGTCAGGTTTTTCCTAATCCCGACCAGCCATTCTTCCCGGAGGTTCCCACCGGACCCACTACCGATGCCAGCCAGCCTCCCCCTGCGACTACCAATGGCACAGCCCCAATTCCCACCGCAACTCAACCCACCAAGCCTACTAAGAAAGTGGCCATTGCGATATCGGTTGGGATCGTCACACTTGGGATGTTATCGGCGCTGGCTTTCTTCTTGTATCGCCACCGAGTGAAGCATCCTGGCGAGTCACAGAAGCTTGTCGGTGGGGGTTCGCAGAGTTTTCAGGAGGAATCGAGAGTGCCGCCGTCGAGTTTTCTGTACATTGGGACGGTGGAGCCGTCGAGAAGATCGGGCAATGAGGCGAATGGTGCCAATGGAACAAATGGATCGCCTTATCATAAGCTGAATTCGATTAAAAGATCGGATCGGTATCGGCCTAGTCCAGAGCTGCAGCCACTGCCACCACTGAACAACCCTCCGGTCAGAAATAATTCACCTCAGGCTATGTCGTGGTCGGATGAGGAGGGTCATGAGACAGTCTTCTACACGCCGCAAGCCTCCTCCATCGGCAATGACGAAGGCTTTTACACTCCGGTTTCACGACAGAATAGTAATTCGATCAACAGCAGCTCTGCAACTCCTGCGAAAACTGAATCTCATGGTACCAGTCCAGTTCCTCATTCTAAGAGGACCTCTCCCAAATCGCGGCGTTCAGCTTCGTCGCCGGAGACTAAGCATGCTATCATACCATCAATAAAGCAGCAACCTCCTCCTCCTCCTCCTCCTCCGCCACCTCCGTCACGGCCACCGCAACAGCTCAGTGCTCAATCTAGTCAACTAGCAATTGCACACACCCCTAAAAGGCCAAAGTTTTCGACACCTCCACCCCCACCGAATGTGGCGCGACTTCAGGCATTGACCAACCAATTCACAGAGACATCCACAATCCCAGCTCCGCCTCCTCCTCCACCTCCTCCACCACTAACAACACCCAGGAAATCGGGGAGTTCGGAATCAAGTGTCCCCCTGATTCCATCTGAAGTATTGACAACTCCACAATCTCGAATTCTTAAAACAAACTCCACTCCTGGGAATGAGATGACAAAACCCCTTGAAAATGGCAGTGGAGGCGCAAGTTCTTCTGGGAGGCTTGATGCTGATGATGTGGATGGAGCGAAACCCAAGCTTAAGCCTCTGCACTGGGACAAAGTACGGGCAACTTCGGATAGAGCCACAGTGTGGGACCAACTGAAATCGAGCTCCTTTCAATTAAATGAGGACATGATGGAGACTCTCTTTGGCTGCAATTCCGCGGTTTCTATTCCCAAAGAAGCAACTAGAAAATCAGTTCTCCCCCCTGTTGAGCAGGAGAACAGAGTGTTGGATCCAAAGAAGTCACAGAACATAGCTATTTTGTTAAGGGCATTGAATGTGACACGAGATGAGGTTTCCGAAGCTCTTTTGGATGGTAACCCAGAAAGCTTGGGTGCTGAGCTTTTGGAAACTTTAGTAAAGATGGCTCCCACCAAGGAGGAAGAAATAAAACTTCGAGATTACAGTGGTGACATCTCGAAACTAGGAACTGCAGAACGATTTCTCAAAGCAGTACTCGATATCCCATATGCATTCAAAAGAGTTGAAGCCATGCTATACAGAGCCAATTTTGATACAGAAGTAAAATACCTGAGGAAGTCCTTTCAAACCCTAGAGGCAGCAAGTGAGGAATTGAAGAACAGCCGCCTGTTCCTTAAACTCCTTGAAGCTGTTCTCAGGACAGGAAATCGAATGAATGTTGGCACCAACAGGGGTGATGCTAGAGCTTTTAAACTCGACACACTCTTGAAATTAGTAGACATAAAGGGAACAGATGGTAAGACAACGTTGCTCCACTTTGTGGTGCAAGAGATTATCAGGTCTGAAGATGGAGGTTCTGATCCTACCAATGAGAATCTTCAAACCAAGTCACAAACTAAAATGGAGGATGACTTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGGCTGAGCCGGGACCTCGGCAATGTGAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTATGTGTCTAAACTTGAAGTAGGCCTTGAAAAAGTGAAATTGGTTTTGCAATATCAGAAGCCAAATGTCACAGGGAAATTCTTCGACTCAATGAAGCTGTTTCTTAAAGAGGCTGAAGAAGAAATCATCAAGATTAAGACCGATGAAAGAAAGGCACTATTGCTTGTGAAAGAGGCCACAGAATATTTTCATGGTGATGCAGCAAAGGAAGAAGCCCATCCTTTCAGAATCTTCATGATCGTAAGAGATTTTCTCTCCATATTGGATCAAGTGTGCAAGGAAGTGGGAAGGATGCAGGACAGAACAATGGTGGGTTCTGCTAGATCCTTCCGGATATCTGCAACTGCTTCACTGCCAGTTCTCAGCAGGTACAATGTGAGACAAGATACAAGTTCAGACGAGGAAAGCTCATCTCCATGA 2661 0.481 MRLVCFYLFFVLLLSFSLHTAATALSQRRILHQPLFPDSSPPPGADSPPPPPPDSQVFPNPDQPFFPEVPTGPTTDASQPPPATTNGTAPIPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKHPGESQKLVGGGSQSFQEESRVPPSSFLYIGTVEPSRRSGNEANGANGTNGSPYHKLNSIKRSDRYRPSPELQPLPPLNNPPVRNNSPQAMSWSDEEGHETVFYTPQASSIGNDEGFYTPVSRQNSNSINSSSATPAKTESHGTSPVPHSKRTSPKSRRSASSPETKHAIIPSIKQQPPPPPPPPPPPSRPPQQLSAQSSQLAIAHTPKRPKFSTPPPPPNVARLQALTNQFTETSTIPAPPPPPPPPPLTTPRKSGSSESSVPLIPSEVLTTPQSRILKTNSTPGNEMTKPLENGSGGASSSGRLDADDVDGAKPKLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSAVSIPKEATRKSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLRDYSGDISKLGTAERFLKAVLDIPYAFKRVEAMLYRANFDTEVKYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDARAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDGGSDPTNENLQTKSQTKMEDDFKKQGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEVGLEKVKLVLQYQKPNVTGKFFDSMKLFLKEAEEEIIKIKTDERKALLLVKEATEYFHGDAAKEEAHPFRIFMIVRDFLSILDQVCKEVGRMQDRTMVGSARSFRISATASLPVLSRYNVRQDTSSDEESSSP* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1108 886 MobiDBLite consensus disorder prediction 34 100 - -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 168 188 - -
Vvi7g1108 886 Pfam Formin Homology 2 Domain 444 835 IPR015425 -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 78 100 - -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 36 68 - -
Vvi7g1108 886 SUPERFAMILY Formin homology 2 domain (FH2 domain) 370 848 - -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 368 384 - -
Vvi7g1108 886 Gene3D Formin, FH2 domain 439 847 IPR042201 -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 165 447 - -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 305 324 - -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 385 433 - -
Vvi7g1108 886 MobiDBLite consensus disorder prediction 234 301 - -
Vvi7g1108 886 PANTHER FORMIN-RELATED 339 880 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi7g1108 886 ProSiteProfiles Formin homology-2 (FH2) domain profile. 439 861 IPR015425 -
Vvi7g1108 886 SMART it6_source 439 850 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1108 Vvi-Chr7 15484497 15494123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1108 26 876 FH2 protein (formin) Gene Family AT5G67470 60.066 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1108 - - vvi:100249049 1525.76