Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1104 ATGGAAAGCTATTTGGACGAGAACTTCTCAGGAGTGAAGCCAAAGCATTCGTCGGATGAGGTGTTGCAGAGATGGAGGAATCTTTGCAGTGTTGTCAAGAACCCCAAGCGAAGGTTCCGCTTCACTGCCAACCTCTCCAAGCGTGGCGAGGCGGCTGCTATGCGCCGCACCAATCAGGAGAAATTGAGAATTGCGGTATTGGTTTCCAAAGCAGCATTGCAATTTATCCAAGGTGTACCTGTCAGCGACTATGTTGTACCTGAGGAAATCAAAGCTGCAGGTTTTCAGATTTGTGCTGATGAATTGGGATCCATTGTCGAAGGCCATGATGTAAAGAAGCTGAAAATTCATGGTGGGGTAGATGGTATTGCAGAAAAGCTATCCACAAGTACAACCTATGGGCTTACTGCCGACAATAAATTGCTGAATCACAGACAAGAGATTTATGGGATAAATAAATTCACCGAAACTCAAGCTCGAGGCTTCTTGGTATTTGTTTGGGAAGCCCTTCATGACATGACACTCATAATCCTTGCTGTGTGTGCGCTTGTGTCTCTGATAGTTGGCATTGCAATGGAAGGGTGGCCGGTGGGGGCCCATGATGGCCTTGGGATTGTTGCTAGTATCCTGTTGGTTGTGTTAGTCACGGCAACAAGTGATTATCGGCAATCTTTACAGTTTAGGGATTTGGACAAAGAGAAGAAGAAGATCTCCATTCAGGTCACAAGGAATGGATATAGGCACAAAATGTCGATATATGATTTGCTTCCTGGTGATATAGTGCATCTTTCTATTGGAGACCAGGTCCCTGCTGATGGACTTTTTGTTTCAGGATTTTGTGTGTCAATTGATGAATCAAGTTTAACTGGAGAGAGTGAACCAGTAATGGTAAGTGCAGAAAATCCTTTTCTGCTGTCTGGAACTAAGGTTCAAGATGGATCATGCAAGATGATGATTACTACTGTTGGAATGAGAACCCAATGGGGTAAATTGATGGCCACTCTTAGTGAAGGGGGAGATGACGAGACTCCATTGCAAGTTAAATTGAATGGAGTGGCAACCTTTATTGGGAAGATAGGCCTTGTCTTTGCTGTGGTGACATTTGCGGTTCTGGTTCAAGGATTGTTTAACCGTAAACTGGGAGAGGGGACCCACTGGAGTTGGTCAGGAGATGATGCATTGGAAATGTTGGAATTCTTTGCCATTGCTGTTACAATTGTTGTTGTCGCAGTCCCTGAGGGGCTGCCTTTGGCTGTCACATTGAGCCTTGCTTTCGCAATGAAGAAGATGATGAATGACAAGGCACTCGTCCGCCATCTGGCAGCTTGTGAGACGATGGGTTCTGCAACATGTATCTGCAGTGACAAGACTGGGACTCTAACTACTAACCACATGACTGTTGTGAAATCATGCATTTGTATGAATGTGAAGGATGTGGACAGACAGAGCAATGCTTCTAGTTTCTGTTCTGAAATCCCAGATTCTACTGTGAAACTTCTGCTACAATCGATATTTAATAACTCTGGTGGAGAAGTCGTGATTAACAAAGAAGGGAAGCTTGAGATACTGGGATCGCCCACTGATGCTGCTTTGCTGGAGTTTGGATTGTTCCTTGGTGGAGACTTTCAAGGAGAGCGACAAGCACCCAAACTAATTAAGGTTGAGCCATTCAATTCAACAAAGAAGCGAATGGGTGTAGTGCTAGAACTTCCAGAAGGAGGTCTGCGAGCCCATACTAAAGGTGCTTCAGAAATTATTTTGGCTGCCTGTGACAAGATGATCGATTCTAATGGTGAGGTTGTTCCCCTTGATGAAGCATCTATTGACCATCTTAAGGCTACAATCAATCAATTTGCCAGTGAAGCACTTCGAACTCTATGCCTTGCCTATATGGAACTGGAGAATGGGTTTTCCCCCAATGATCCTATTCCTCTTTCGGGATATACCTGTATAGGTATTGTGGGTATCAAAGATCCTGTTCGCCCAGGTGTTAAGGAGTCCGTTGCAATTTGTCGCTCAGCTGGCATTACTGTAAGGATGGTTACAGGTGACAACATAAATACTGCCAAGGCTATTGCTAGAGAATGTGGAATTCTCACTGATGATGGTATAGCCATCGAAGGTCCAGATTTTAGAGAGAAGAGCGAAGAAGAATTGTTTAAACTAATTCCCAAAATTCAGGTAATGGCTCGATCTTCACCTTTGGACAAGCATACACTGGTGAAACACTTAAGAACCACATTTGGTGAAGTTGTTGCTGTGACCGGTGATGGAACAAATGATGCACCAGCACTTCATGAGGCAGATATTGGGCTAGCAATGGGCATTGCTGGAACTGAGGTGGCTAAAGAGAGTGCTGATGTAATAATCTTGGATGATAATTTCTCCACAATTGCGACTGTGGCCAAATGGGGACGTTCAGTCTACATAAATATTCAAAAATTTGTACAGTTCCAACTTACGGTTAACGTGGTTGCATTAATAGTCAACTTCTCTTCAGCTTGTTTGACAGGAAATGCTCCCCTCACGGCTGTTCAGCTTCTGTGGGTCAACATGATCATGGATACACTGGGAGCTCTTGCATTAGCAACTGAGCCACCTACTGATGACTTAATGAAGAGAGCACCAGTTGGAAGAAGAGGAAATTTTATCAGTAATGTCATGTGGAGAAATATCCTAGGCCAGTCCCTATATCAGTTTCTGGTAATATGGTATCTTCAGGTAGAAGGGAAAGCAATATTTCAGCTCAATGGCCCTGATTCTGATCTGATCCTGAATACACTTATTTTCAACTCGTTTGTCTTCTGCCAGGTTTTCAATGAGATAAGCTCCCGAGAAATGGAGAAAATCAATGTATTCAAAGGCATACTGGATAACTATGTATTTGCTGCTGTTCTCACTTCCACCGTCCTTTTCCAGATCATAATCATCGAGTACCTGGGTACATATGCAAACACATCACCTCTCACTCTATCCCAATGGTTCCTCAGTGTTTTTATTGGGTTCCTAGGCATGCCAATCGCTGCGGCCTTAAAGATGATCCCTGTGGCAAGTCAATGA 3060 0.4386 MESYLDENFSGVKPKHSSDEVLQRWRNLCSVVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRIAVLVSKAALQFIQGVPVSDYVVPEEIKAAGFQICADELGSIVEGHDVKKLKIHGGVDGIAEKLSTSTTYGLTADNKLLNHRQEIYGINKFTETQARGFLVFVWEALHDMTLIILAVCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISIQVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGESEPVMVSAENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATFIGKIGLVFAVVTFAVLVQGLFNRKLGEGTHWSWSGDDALEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATCICSDKTGTLTTNHMTVVKSCICMNVKDVDRQSNASSFCSEIPDSTVKLLLQSIFNNSGGEVVINKEGKLEILGSPTDAALLEFGLFLGGDFQGERQAPKLIKVEPFNSTKKRMGVVLELPEGGLRAHTKGASEIILAACDKMIDSNGEVVPLDEASIDHLKATINQFASEALRTLCLAYMELENGFSPNDPIPLSGYTCIGIVGIKDPVRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKSEEELFKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRAPVGRRGNFISNVMWRNILGQSLYQFLVIWYLQVEGKAIFQLNGPDSDLILNTLIFNSFVFCQVFNEISSREMEKINVFKGILDNYVFAAVLTSTVLFQIIIIEYLGTYANTSPLTLSQWFLSVFIGFLGMPIAAALKMIPVASQ* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1104 1019 SFLD C1.7: P-type atpase like 435 807 - -
Vvi7g1104 1019 FunFam Calcium-transporting ATPase 17 77 - -
Vvi7g1104 1019 Pfam Cation transporter/ATPase, N-terminus 118 185 IPR004014 -
Vvi7g1104 1019 Gene3D - 450 800 IPR023214 -
Vvi7g1104 1019 Gene3D - 463 659 IPR023299 GO:0000166
Vvi7g1104 1019 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Vvi7g1104 1019 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1015 IPR023298 -
Vvi7g1104 1019 SUPERFAMILY HAD-like 452 860 IPR036412 -
Vvi7g1104 1019 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Vvi7g1104 1019 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Vvi7g1104 1019 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Vvi7g1104 1019 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Vvi7g1104 1019 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Vvi7g1104 1019 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Vvi7g1104 1019 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Vvi7g1104 1019 FunFam Calcium-transporting ATPase 217 336 - -
Vvi7g1104 1019 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Vvi7g1104 1019 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Vvi7g1104 1019 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi7g1104 1019 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi7g1104 1019 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi7g1104 1019 NCBIfam HAD-IC family P-type ATPase 725 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi7g1104 1019 NCBIfam HAD-IC family P-type ATPase 393 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi7g1104 1019 FunFam Calcium-transporting ATPase 648 800 - -
Vvi7g1104 1019 Pfam Cation transport ATPase (P-type) 515 592 - -
Vvi7g1104 1019 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 1016 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vvi7g1104 1019 Gene3D - 142 336 - -
Vvi7g1104 1019 SFLD p-type atpase 435 807 IPR044492 -
Vvi7g1104 1019 Gene3D - 168 1013 - -
Vvi7g1104 1019 FunFam Calcium-transporting ATPase 772 1018 - -
Vvi7g1104 1019 Pfam haloacid dehalogenase-like hydrolase 652 769 - -
Vvi7g1104 1019 CDD P-type_ATPase_Ca_PMCA-like 142 888 - -
Vvi7g1104 1019 PANTHER CATION TRANSPORTING ATPASE 65 1016 - -
Vvi7g1104 1019 SMART Cation_ATPase_N_a_2 116 190 IPR004014 -
Vvi7g1104 1019 Gene3D - 17 77 - -
Vvi7g1104 1019 Pfam Cation transporting ATPase, C-terminus 840 1014 IPR006068 -
Vvi7g1104 1019 Pfam E1-E2 ATPase 237 431 - -
Vvi7g1104 1019 FunFam Calcium-transporting ATPase 463 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1104 Vvi-Chr7 15444488 15450197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1104 1 1016 Primary Pumps ATPases AT4G37640 82.793 0.0 1727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1104 K01537 - vvi:100247373 1974.9