Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g1049 | ATGGAGCGTTATGAGATTTTGAAAGATATAGGGTCTGGAAACTTTGGTGTGGCCAAGCTTGTGAGGGATAAGTGGAGTGGTGAGCTCTATGCAGTCAAGTATATTGAGAGGGGGCAAAAGATTGATGAGCATGTACAGAGGGAGATTATGAATCACAGGTCCTTGAAGCATCCCAATATAGTTAGATTTAAGGAGGTCCTGCTAACACCAACCCATCTGGCTATAGTCATGGAATATGCTGCTGGAGGAGAGCTTTTTGAGAGAATATGTAATGCCGGTAGATTCAGCGAGGATGAGGCTAGGTATTTTTTTCAACAGCTGATATCAGGAGTCAGTTACTGCCACTCCATGCAAATTTGCCACCGCGATCTAAAGCTGGAAAATACACTCTTAGATGGAAGCCCAGCACCACGTCTCAAAATTTGCGACTTTGGCTATTCCAAGTCATCTGTGTTGCACTCCCAACCAAAATCTACTGTGGGAACACCAGCCTACATTGCTCCAGAGGTATTATCAAGGAAAGAATACGATGGAAAGATTGCAGATGTTTGGTCTTGTGGGGTTACCTTATATGTGATGCTTGTTGGTGCTTATCCATTTGAAGATCCTGATGATCCAAGAAATTTCAGGAAAACAATTGCGCGAATACTTAGTGTTCACTACTCTATTCCAGACTACGTCCGAGTTTCAATGGAGTGTAAACATCTTCTATCTCGAATATTTGTGGCAAACCCTGAAAAGAGAATAACCATTCCAGAAATCCAAAATCATCCATGGTTCATAAGGAACTTGCCCATAGAGTTCATGCAAGGAGGAGAAGCTAGCGCCCAAACTGATTATGTAAATGACCCATCCCAAAGTATTGATGATATAGTAAAGATAATACAAGAGGCGCGGATTGAGGGGCCTAAAGTTGGTGGGCATTTTTTTGGGGCCAGCATGGATTTGGATGACTTGGACGAAGATGCTGATCTAGATGATATAGAGGCGAGCGGTGATTTTGTTTGTGCATTGTGA | 1017 | 0.4277 | MERYEILKDIGSGNFGVAKLVRDKWSGELYAVKYIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTIARILSVHYSIPDYVRVSMECKHLLSRIFVANPEKRITIPEIQNHPWFIRNLPIEFMQGGEASAQTDYVNDPSQSIDDIVKIIQEARIEGPKVGGHFFGASMDLDDLDEDADLDDIEASGDFVCAL* | 339 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g1049 | 338 | SMART | serkin_6 | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g1049 | 338 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 79 | - | - | |
Vvi7g1049 | 338 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Vvi7g1049 | 338 | FunFam | Serine/threonine-protein kinase SRK2E | 80 | 268 | - | - | |
Vvi7g1049 | 338 | ProSiteProfiles | Protein kinase domain profile. | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g1049 | 338 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 268 | IPR011009 | - | |
Vvi7g1049 | 338 | PANTHER | SERINE/THREONINE KINASE | 2 | 275 | - | - | |
Vvi7g1049 | 338 | CDD | STKc_SnRK2 | 3 | 259 | - | - | |
Vvi7g1049 | 338 | Gene3D | Transferase(Phosphotransferase) domain 1 | 80 | 267 | - | - | |
Vvi7g1049 | 338 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 119 | 131 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi7g1049 | 338 | Pfam | Protein kinase domain | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g1049 | 338 | FunFam | Serine/threonine-protein kinase SAPK2 | 1 | 79 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi7g1049 | Vvi-Chr7 | 14826379 | 14829275 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi7g1049 | 3 | 269 | CBL-interacting serine-threonine protein kinases | AT4G24400 | 43.478 | 2.44e-69 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Vvi7g1049 | Pkinase | 2.9e-72 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g1049 | K14498 | - | vvi:100853603 | 676.396 |