Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1047 ATGTCTCTTCTCGTTCTTCTCTGCATCCTCAACATAGCAACCGCCACTGCAGCCCATCTCCGGCCTGGGTTCTACTCTGAATCTTGCCCCGAAGCAGAGTTAATAGTGAGGGAAGTGATGAAGAAGGCCATGATTAAAGAACCCAGGAGTGGGGCATCGGTCATGCGACTACAATTCCATGACTGCTTTGTTAATGGGTGTGATGCTTCTTTGTTACTAGATGATACACCAAACATGTTAGGGGAAAAGCTGGCTTTATCGAATATAAACTCGTTAAGATCCTTCGAAGTTATCGACCAAGTGAAGGAAGCATTGGAGAAGTCATGTCCAGAGACGGTTTCTTGCGCAGATATCATAATCATGGCCTCTAGAGATGCGGTGGCACTGAGCGGAGGACCCGACTGGGAAGTGAAGCTAGGAAGAAAAGACAGCTTAACGGCGAGCCAAGAAGACTCGAACAACATCATGCCAAGCCCAAGATCGAACGCCAGTTTCCTCGTAGATCTCTTCAACCAATTCAATCTATCTGTCAAGGATCTTGTAGCCCTTTCTGGTTCACACTCCATCGGACAGGGCAGGTGCTTTTCCATCATGTTTCGACTCTATAACCAATCAGGTACGGGCCGCCCTGACCCTGCCATCGAACCGAAGTATAGAAACAGGCTGAACAAGCTTTGCCCGCTCAACGTAGACCAGAACGTGACAGGAGACCTCGATGCAACACCCGAAATATTTGATAACCAATACTTCAAGGACTTGGTTTCAGGGAGAGGGTTCTTGAATTCAGATGAGACACTATTCACCTATCCGCGGACCAGAAAATTTGTGCAGGTTTATAGTAATGACCAAATTAAATTTTTCAAGGATTTTGCCAAGGCGATGATAAAGATGGGAGACTTGCAGTCTGGGCGGCCAGGAGAGATCAGAAGAAACTGTAGAATGGTTAACAGCCGGTCAGTCGACACACTCCTGGAATCTTAA 981 0.4699 MSLLVLLCILNIATATAAHLRPGFYSESCPEAELIVREVMKKAMIKEPRSGASVMRLQFHDCFVNGCDASLLLDDTPNMLGEKLALSNINSLRSFEVIDQVKEALEKSCPETVSCADIIIMASRDAVALSGGPDWEVKLGRKDSLTASQEDSNNIMPSPRSNASFLVDLFNQFNLSVKDLVALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPKYRNRLNKLCPLNVDQNVTGDLDATPEIFDNQYFKDLVSGRGFLNSDETLFTYPRTRKFVQVYSNDQIKFFKDFAKAMIKMGDLQSGRPGEIRRNCRMVNSRSVDTLLES* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1047 326 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Vvi7g1047 326 Gene3D Peroxidase, domain 2 157 297 - -
Vvi7g1047 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Vvi7g1047 326 CDD secretory_peroxidase 19 315 IPR033905 GO:0004601|GO:0042744
Vvi7g1047 326 FunFam Peroxidase 23 164 - -
Vvi7g1047 326 Pfam Peroxidase 36 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 Gene3D - 23 316 - -
Vvi7g1047 326 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 SUPERFAMILY Heme-dependent peroxidases 20 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 FunFam Peroxidase 157 297 - -
Vvi7g1047 326 ProSiteProfiles Plant heme peroxidase family profile. 19 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1047 326 PANTHER PEROXIDASE 72-RELATED 17 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1047 Vvi-Chr7 14810226 14811642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1047 4 326 Peroxidase AT2G22420 76.161 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1047 K00430 - vvi:100242338 650.203