Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1042 ATGGCTTTGGAACTTATTGGAGAGACAGTCGTGGAAACACTGATCGGAGAATTGATAAAAGCGATTTTAGATGAGGGGAAAAAGGCAGCTGAGTTCCAGGCCATCTTCGATCGCCTCCAATCCACGCTCATCTCCATAGGTCCAACGATCCAAGAGATTGAAAGGTTAAACAAAGAGTCGGATCGTTCAAAGGAAACAGAGCAGTTGGTCCAAATGTTGAAAGATGGGAAGGAGCTTATTCAAAAGTGTTCCAAGGTCACATGGTGGCACTATCATAAGAAGTGGAAGTACAGCAATAAACTTCTGGACCTGGATGAGTCTCTTCTTCGTTTCTTTCAGGTGGATATGGCAGTGCAGGGATTCAGGGACATCAAGGAGATTAAGTTGGGTCAGAGAGATCCATACCATTTGAAATTGGGTCCATGCCAGGCTCCTGATCCCCCTCCTCTTACAGTTGGACTGGATATACCCCTGCAAGAGTTGAAGATGCGGCTGTTTAGGGATGATTCATCGGTGATTGTGGTTTCAGCTCCCGGAGGATGTGGGAAGACCACCTTGGCTAAAATGCTTTGTCATGATCATCAAGTTAAAGAAAAATTCAAGAACAACATCTTCTATGTTACCGTATCAAAAGCGTTCAACCTGAATGCCATTGTACAGAGTCTATTTCAACATAATGGTCATGGGGTTCGAGTTTTTCAAAATGATGAAGATGCAGTCAACCAATTGGAACGACTACTGAACCAAATAGCACCAGCTCCTATACTTCTGGTTCTAGATGATGTTTGGGGTGGATCAGAATCCCTTCTTGACAATTTTGTGTTTAAAATACCAAATTACAAGATTCTGGTTACATCAAGATTTGAATTTCCAAGATTTGGTTCTACCTATAAGTTGCCATTGTTGAAGGATGAAGATGCCATGACTCTTTTTCGTAGCTCAGCATTCCAGCAAGATGGGAGGTCTTATATGCCTGATGAAGACCTTGTGGAAAAGATTGTGAAAGGCTGCAAGGGATTTCCTCTGGCCCTCAGAGTCGTTGGTAGATCACTATGTGGCCAGCCTGCAGAGGCATGGGAAAGTAGACTGCTGACATGGTCAGAGGGCCAATCCATTTTCAGTTCAGATAGTGATCTACTTCTTTGCCTCCAAAGTAGCTTAGATGCCTTGGCTGACAAGGGTATACTGAAGGAGTGTTTTATGGACTTGGGCTCATTTCCTGAAGACCAAAAAATTCCTGCCACTGCTCTTATAGATATGTGGGCAGAACTGTACAAACTCCATACAGGTGGTGTCTTTGCCATTAATAACCTCCAAGAACTCTCCTTCAGGAATCTGCTTAGTCTTGTGGATGCAAGGAAAGATGAAAGTGATGTTGATGGCTGCTACAATGACACCTATGTCATGCTGCATGATCTTCTCAGAGAGCTAGCTATTTATCAAAGCAGCCAGGAACCCATAGAACAGAGGAAAAGACTAATTGTGGACTTATCTGGAGACAAAGTTCCTAACTGGTGGACACAAGACAACCAACAACCCTTTGGGGCTCGCCTTTTGTCTATCTCCACAGATGAACTGTTCTCCTCAAGCTGGTGCAACATACAAACACCTGAACTGGAGGTCCTAATACTGAACTTCCAGTCAAAGGAAAACTACACATTACCAGAGTTCATCAAGCAAATGGAGAAACTGAAGGTTCTAGTACTAACAAATAATGGCCCCAGCCCTGCCCAACTGATTAATTTTTCAGTGCTGGGTTCTTTACCCAGTCTAAAGCGAATCAGGTTCGAGCAGGTTCGAATTCCTCCCCTTTGCAACACCACAGCAGAATTCAAGAACTTGGAGAAAATATCCTTGGTTATGTGTAAAATCAGTGAGGCTCTCAGCAACCGTAGCATTCAGATTTCAAACATGTTTCCAAATCTTGTGGAGCTCAATATTGATTACTGCAATGACTTGGTGGAATTACTTGAGGGGCTTTGTGATTTAGTGGAACTAAAGAAGCTTAGCATCAGCAACTGTCCAAAGCTATCTGCTCTACCCAAAGGAATAGGGAAGCTGGGAAATTTGGAAGTGCTAAGGCTCCGAGACTGCGTGAAACTGTCAGGATTGCCGGACTCAATTGGAAGGCTCCATAAGTTGAGCGTACTTGATATTAGCGGTTGTCTGCAAATAAAGGAAATACCAAAACAAATGGGAGAGTTATGTAATTTGAGAAAGATCCACATGAGAGAGTGCTGGAGCTTGTGCAGGAGCGAGTTGCCAGCATCAGTGATGAATCTGGTGGGTTTGAAGAAGGTAATCTGCGACACAGAAACAGCCAAGCTGTGGGAACCTTTTGAGTACCATCTCAAGAACTTGAGGATATCAGTGCCAGAAGAGAATATCAACTTGAACTGGCTTTGA 2406 0.4356 MALELIGETVVETLIGELIKAILDEGKKAAEFQAIFDRLQSTLISIGPTIQEIERLNKESDRSKETEQLVQMLKDGKELIQKCSKVTWWHYHKKWKYSNKLLDLDESLLRFFQVDMAVQGFRDIKEIKLGQRDPYHLKLGPCQAPDPPPLTVGLDIPLQELKMRLFRDDSSVIVVSAPGGCGKTTLAKMLCHDHQVKEKFKNNIFYVTVSKAFNLNAIVQSLFQHNGHGVRVFQNDEDAVNQLERLLNQIAPAPILLVLDDVWGGSESLLDNFVFKIPNYKILVTSRFEFPRFGSTYKLPLLKDEDAMTLFRSSAFQQDGRSYMPDEDLVEKIVKGCKGFPLALRVVGRSLCGQPAEAWESRLLTWSEGQSIFSSDSDLLLCLQSSLDALADKGILKECFMDLGSFPEDQKIPATALIDMWAELYKLHTGGVFAINNLQELSFRNLLSLVDARKDESDVDGCYNDTYVMLHDLLRELAIYQSSQEPIEQRKRLIVDLSGDKVPNWWTQDNQQPFGARLLSISTDELFSSSWCNIQTPELEVLILNFQSKENYTLPEFIKQMEKLKVLVLTNNGPSPAQLINFSVLGSLPSLKRIRFEQVRIPPLCNTTAEFKNLEKISLVMCKISEALSNRSIQISNMFPNLVELNIDYCNDLVELLEGLCDLVELKKLSISNCPKLSALPKGIGKLGNLEVLRLRDCVKLSGLPDSIGRLHKLSVLDISGCLQIKEIPKQMGELCNLRKIHMRECWSLCRSELPASVMNLVGLKKVICDTETAKLWEPFEYHLKNLRISVPEENINLNWL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1042 801 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 130 IPR008808 -
Vvi7g1042 801 Pfam NB-ARC domain 158 351 IPR002182 GO:0043531
Vvi7g1042 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 403 IPR027417 -
Vvi7g1042 801 Gene3D - 10 118 IPR036537 GO:0007166
Vvi7g1042 801 Gene3D - 135 290 IPR027417 -
Vvi7g1042 801 PRINTS Disease resistance protein signature 172 187 - -
Vvi7g1042 801 PRINTS Disease resistance protein signature 337 351 - -
Vvi7g1042 801 PRINTS Disease resistance protein signature 249 263 - -
Vvi7g1042 801 PRINTS Disease resistance protein signature 709 725 - -
Vvi7g1042 801 Gene3D Ribonuclease Inhibitor 516 798 IPR032675 -
Vvi7g1042 801 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 801 IPR039203 GO:0050832
Vvi7g1042 801 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Vvi7g1042 801 SUPERFAMILY RNI-like 528 751 - -
Vvi7g1042 801 FunFam Probable disease resistance protein At5g66900 145 292 - -
Vvi7g1042 801 Gene3D - 382 480 IPR036388 -
Vvi7g1042 801 Gene3D - 301 376 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1042 Vvi-Chr7 14751830 14755100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1042 180 730 WRKY Transcription Factor Family AT5G45050 24.737 5.34e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1042 - - vvi:100246132 1588.93