Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1041 ATGGCTTTGGAGCTTGTTGGAGGGGCTGCTTTGGGAGCAGTGTTTGAGAAGTTGTTCGCGGCGGTTGTAGATGCAAGCAATAAGGCAACTCAGTTCGAGTCCAGCCTCAAAAAACTCGAAGAGACACTCAAATCCATAAATCCAAGTATCCTAGAGATGAAAAAGTTGAACGACGAGTTGGATCGTCCAAAGGAGGAAATGGAGAAGTTGATCCAAATCTTAAAAGATGGGGAGAAGCTAATCCACAAGTGCTCCAAGGTCTCTTGTTGCAGCTGCTTCAAGAAGTGGAGGTACGCCAATAAAATTGAGGCCTTGGAGGACTCTCTTCTTAATTTTTTTCAGGTGGAATTGCAAGCCCAACTCGGTAGGAACAACGTAGAGATTCTGGTCATGCTCAAATCAAATAGATTCAGTTTGAGTAACAGAGGGGTTTCCGATAACTTCGAAAATTTGGGTTCCTGTGAGGCTACTGATCCGCCGGCTTTTATGGTGGGACTAGATGTGCCTCTCAAAGAATTGAAGAGGTGGCTGTTTACGGATGGGGAGTCAAGGATTGTGGTGTCGGCTCCTGGAGGATGTGGGAAAACCACTTTGGCTAAAAGGCTTTGTCACGACCAACAAGTCAAGGAATATTTTACGGACATTTGCTATGTCACGGTGTCAAAAGCATGCGACCTAATTGGCATCATCAAGAAACTATTTTGGCATAATGATGAACAAGTGCCGTCGTTTCAAAATGAGGAAGATGCAGTCAACCAATTGGAAAGAATGCTGAAGAGGAAAGTAGAATCTGGTCGTATACTGTTGGTCCTAGACGATGTTTGGTCTGGTTCGGAATCTGTCCTAGCCAAGTTTAAGAAAATATCGGGATACAAGGTTCTGGTTACATCTAGAAATGAATTTCCAGAATTTGGTTCTACATATCACTTGAAATTGTTGAGTGAAGAAGATGCCAAGACTCTTTTCCGTCACTCAGCAATCCCTGAGGATGGGAGCGGTTCTTCCATGCCCAGTGAAGACCTTGTGAATACGATAGTGAGGTGCTGCAAGGGATTTCCACTGGCCCTGGAAGTGGTTGGCAGATCACTCCATGGGCAGCCTGTAGAGATCTGGAGAAGCACACTGATGAAATTATCTGAAGGTCAATCCATAGTCAATTCTGAAGATGAACTGCGTAATTGTCTTCAAAGTAGCTTAGATGCCCTTGATGACAAGGATATTATGCTGAAGGAGTGTTTTATGGACTTGGGCTCATTTCCTGAAGACCAAAAAATCCCTGCCACTGCTCTTATAGATATGTGGGCGGAATTGCACAAACTAGATAAAGGCGGCATTTATGCCATTTCCAACCTTCAGAAACTCTGCTCTCGGAATCTGCTTAATCTTGTGGTCACAAGGAATGATGCAAATGAGATTGATGGGTGCTACAACGATGCCTTTGTCATGCAGCATGATCTTCTCAGGGATCTAGCCATTTATCAGAGCGAACAGGAGCCCATAGAAAAGAGGAAAAGACTAATCGTGGACTTGACAGGAAACAGACTCCCCGAGTGGTGGACTAAAGAGAAGCAACCCCGATCAAGTGCTCGTCTTGTGTCCATCTCCACAGATGAAATGTTCTCCTCAAGCTGGTGCAACATGCAACTTCCTGAAGCTGAGGTTCTAATACTGAACTTTAATCAGACAGAAAAGAAATACGAATTGCCAGAGTTCATGAAGCAAATGGATGAACTGAAGGTTCTAGTAGTAACAAATTATGGTTTCTGCACTGCTGAATTGACTAATTTTTCAGTACTTGGTTCCTTATCCAATCTAAAGAGAATCAGGTTAGAGCAAGTTTCAATTCCAACACTATGCAACACCAGTATGGAATTGAAGAATCTGGAGAAGCTATCCTTAGTCATGTGTCATAAGATTGGTCAGGCTTTTGCAAGTAGTACCATCCAGATTCCAGAAATGTTACCCAACCTTAGGGAAATCAACATTGATTACTGTAATGACTTGGTGGAATTACCAGAAGGGTTTTGTGATTTAGTCCAGCTGAATAAGCTGAGCATCGGCAACTGCCATAAGCTGTCTTCACTGCCGGAAGGAATAGGGAAGCTTACAAATCTGGAAGTGCTAAGGGTTAGTGCCTGTACATTGGTGTCAAAATTGCCAGACTCAATGGGAAGCCTCCACAAGTTGAGGGTTCTTGATATAACTGGTTGTTTACGAATAAGGAAAATGCCGAAACAAATAGGCGAGTTGCGTAGTCTAAGAGAGTTCCACATGAGAAGGTGCCCGGGTTTGTGCGAGCTGCCATCATCAGTGACGGATCTCGTGGATTTGAAGAGGGTAATCTGCGATGAAGAGACTGCCCAGCTGTGGGAATGTTATACGCACTTGCTCCCCGATCTCACCCTATCAGTGCCTGAAGAAATTATCAACTTGAATTGGCTTTAA 2445 0.4384 MALELVGGAALGAVFEKLFAAVVDASNKATQFESSLKKLEETLKSINPSILEMKKLNDELDRPKEEMEKLIQILKDGEKLIHKCSKVSCCSCFKKWRYANKIEALEDSLLNFFQVELQAQLGRNNVEILVMLKSNRFSLSNRGVSDNFENLGSCEATDPPAFMVGLDVPLKELKRWLFTDGESRIVVSAPGGCGKTTLAKRLCHDQQVKEYFTDICYVTVSKACDLIGIIKKLFWHNDEQVPSFQNEEDAVNQLERMLKRKVESGRILLVLDDVWSGSESVLAKFKKISGYKVLVTSRNEFPEFGSTYHLKLLSEEDAKTLFRHSAIPEDGSGSSMPSEDLVNTIVRCCKGFPLALEVVGRSLHGQPVEIWRSTLMKLSEGQSIVNSEDELRNCLQSSLDALDDKDIMLKECFMDLGSFPEDQKIPATALIDMWAELHKLDKGGIYAISNLQKLCSRNLLNLVVTRNDANEIDGCYNDAFVMQHDLLRDLAIYQSEQEPIEKRKRLIVDLTGNRLPEWWTKEKQPRSSARLVSISTDEMFSSSWCNMQLPEAEVLILNFNQTEKKYELPEFMKQMDELKVLVVTNYGFCTAELTNFSVLGSLSNLKRIRLEQVSIPTLCNTSMELKNLEKLSLVMCHKIGQAFASSTIQIPEMLPNLREINIDYCNDLVELPEGFCDLVQLNKLSIGNCHKLSSLPEGIGKLTNLEVLRVSACTLVSKLPDSMGSLHKLRVLDITGCLRIRKMPKQIGELRSLREFHMRRCPGLCELPSSVTDLVDLKRVICDEETAQLWECYTHLLPDLTLSVPEEIINLNWL* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1041 814 Gene3D - 148 302 IPR027417 -
Vvi7g1041 814 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Vvi7g1041 814 SUPERFAMILY L domain-like 483 779 - -
Vvi7g1041 814 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 140 IPR008808 -
Vvi7g1041 814 Coils Coil 53 73 - -
Vvi7g1041 814 Gene3D - 398 493 IPR036388 -
Vvi7g1041 814 PRINTS Disease resistance protein signature 349 363 - -
Vvi7g1041 814 PRINTS Disease resistance protein signature 184 199 - -
Vvi7g1041 814 PRINTS Disease resistance protein signature 724 740 - -
Vvi7g1041 814 PRINTS Disease resistance protein signature 261 275 - -
Vvi7g1041 814 Gene3D - 313 397 IPR042197 -
Vvi7g1041 814 Coils Coil 244 264 - -
Vvi7g1041 814 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 814 IPR039203 GO:0050832
Vvi7g1041 814 Gene3D Ribonuclease Inhibitor 494 792 IPR032675 -
Vvi7g1041 814 Pfam NB-ARC domain 170 398 IPR002182 GO:0043531
Vvi7g1041 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 416 IPR027417 -
Vvi7g1041 814 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1041 Vvi-Chr7 14739469 14742604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1041 192 772 WRKY Transcription Factor Family AT5G45050 23.232 5.57e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1041 - - vvi:100258874 1606.65