Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1040 ATGGAACTGAAACCGAAGAGGAAAGCAGAATCTGGTACTGTACTGTTGGTCCTAGATGATGTTTGGTGTGGATCAGAATCCCTCTTAGCCAAGTTCAAGTTCCAGATATCAGAATCCAAGGTTCTGGTTACATCAAGAAATGAATTTCTAGAATTTGGCTCTACATATGACTTGGAATTGTTGAATGACGACGATGCCATGGCTCTTTTTCGTCACTCAGCAATCGCCCAGAATGGAAGCTGTAATTACACACCGACTGATAGGCTTGTGAAGAAGATAGTGGGGCACTGCAAGGGACTTCCACTGGCCCTGGAAGTAGTTGGCAGATCACTCCATGGGCAGCCTGTAGAGATCTGGAGAAGCGGACTGATGAAATTATCCGAAGGTCAATCCATTGTCGATTCTGAAACTGATCTGCGTAAATGTCTTCAAAGTAGCTTAGACGCCCTAAATGACGAGGATGTTATGCAGAAGGAGTGCTTTATGGACTTCAGCAGGAATGATGCAAGCGAGATTGATGGATGCTACAGCGGCGCCTTTGTGATGCAGCATGCCTTTTTTGCACTTTCCCTTATTTCCTCTCAATATCTTGATTTCTTCTGTTTCCTACAACTTTTCTCCTCTAGCAAACACAAAACTCCTTCTAATTTTGGGGGTTGTGGTGAGGAGATACTAATGGCTTTGGAGCTTGTTGGAGGGGCTGCGTTGGGAGCAGTGTTTGAGAAGTTGTTCGTGGCGGTTGTAGATGCAAGGACTAAGGCAACCAAGTTCGACTCCAGCCTCAAAAAACTCGAAGAGACACTCAAATCCATAAATCCAAGTATCCTAGAGATGAAAAGGATGAACGACCAGTTGGATCGTCCAAAGGAGGAAATGGAGAAGTTGATCCAAATCTTAAAAGATGGGGAGAAGCTAATCCACAAGTGCTCCAAGGTCTCTTGTTGCAACTACTTCAAGAAATGGAGGTACGCCAATGAAATCAAGGCCTTGGAGGACTCCCTTCTTAAAATTTTTCAGGTGGAATTGCAAGCCCAACTCAGTAGGAACAACATGCAGATTCTGGTCCTGCTCAAATCAAATATATTCAGTTGGAGTAACAGAGGGGTTTCCGTTAAATATGAAAGTTTGGGTTCCTGTGAGGCTACTGATCCGCCGGCTTTTATGGTGGGACTAGATGTGCCTCTCAAAGAATTGAAGAGGGGGCTGTTTACGGATGGGGAATCAAGGATTGTGGTGTCGGCTCCTGGAGGATGTGGGAAAACCACTTTGGCTAAAAGGCTTTGTCACGACCAACAAGTCAAGGTTGACATAAGTGAGGCGCTGCAAGGGATTTCCACTGGCCCTGGAAGTGGTTGGCAGATCGCTCCATGGGCAGCCTGTAGAGATCTGGAGAAGCACATTGATGAAATTATCTGA 1416 0.4548 MELKPKRKAESGTVLLVLDDVWCGSESLLAKFKFQISESKVLVTSRNEFLEFGSTYDLELLNDDDAMALFRHSAIAQNGSCNYTPTDRLVKKIVGHCKGLPLALEVVGRSLHGQPVEIWRSGLMKLSEGQSIVDSETDLRKCLQSSLDALNDEDVMQKECFMDFSRNDASEIDGCYSGAFVMQHAFFALSLISSQYLDFFCFLQLFSSSKHKTPSNFGGCGEEILMALELVGGAALGAVFEKLFVAVVDARTKATKFDSSLKKLEETLKSINPSILEMKRMNDQLDRPKEEMEKLIQILKDGEKLIHKCSKVSCCNYFKKWRYANEIKALEDSLLKIFQVELQAQLSRNNMQILVLLKSNIFSWSNRGVSVKYESLGSCEATDPPAFMVGLDVPLKELKRGLFTDGESRIVVSAPGGCGKTTLAKRLCHDQQVKVDISEALQGISTGPGSGWQIAPWAACRDLEKHIDEII* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1040 471 PRINTS Disease resistance protein signature 97 111 - -
Vvi7g1040 471 PRINTS Disease resistance protein signature 8 22 - -
Vvi7g1040 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 434 IPR027417 -
Vvi7g1040 471 Gene3D - 370 441 IPR027417 -
Vvi7g1040 471 Gene3D - 2 51 IPR027417 -
Vvi7g1040 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 163 IPR027417 -
Vvi7g1040 471 Gene3D - 61 152 IPR042197 -
Vvi7g1040 471 ProSiteProfiles RPW8 domain profile. 225 376 IPR008808 -
Vvi7g1040 471 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 229 360 IPR008808 -
Vvi7g1040 471 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 226 435 IPR039203 GO:0050832
Vvi7g1040 471 Pfam NB-ARC domain 13 132 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1040 Vvi-Chr7 14731136 14734783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1040 14 165 WRKY Transcription Factor Family AT5G45050 28.750 6.91e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1040 - - vvi:109122888 481.485