Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1032 ATGGCTTTGGAGCTTGTTGGAGGGGCTGCGTTGGGAGCAGTGTTTGAGAAGTTGTTCGCGGCGGTTGAAGATGCAAGGACTAAGGCAACCAAGTTCGACTCCAGCCTCAAAAAACTCGAAGAGACACTCAAATCCATAAATCCAAGTATCCTAGAGATGAAAAGGATGAACGACCAGTTGGATCGTTCAAAGGAGGACATGGAGAAGTTGATCCAAATCTTAAAAGATGGGGAGAAGCTAATCCACAAGTGCTCCAAGGTCTCTTGTTGCAACTACTTCAAGAAGTGGAGGTACGCCAATGAAATCGAGGCCTTGGAGGACTCTCTTCTTAAAATTTTTCAGGTGGAATTGCAAGCCCAACTCAGTAGGAACAACATGCAGATTCTGGTCCTGCTCAAATCAAATAGATTCAGTTGGAGTAACAAAGGGGTTTCCGTTAAATATGAAAGTCTGGGTTCCTGTGAGGCTACTGATCCGCCGGCTTTTATGGTGGGACTAGATGTGCCTCTCAAAGAATTGAAGAGGTGGCTGTTTACGGATGGGGAATCAAGGATTGTGGTGTCGGCTCCTGGAGGATGTGGGAAAACCACTTTGGCTAAAAGGCTTTGTCACGACCAACAAGTCAAGGAATATTTTCAGCACATTTTCTATGTCACGGTGTCAAAAACATTCAACCTAATTGGCATCATCAAGAAACTATTTTGGCATAGTGATGAACAAGTGCCGGGGTTTCAAAATGAGGAAGATGCAGTCAACCAATTGGAACTAATGCTGAAGAGGAAAGTAGAATCTGGTCGTCTACTGTTGGTCCTAGATGACGTTTGGTCTGGGTCGGAATCTTTCCTAACCAAGTTTAACTTCCAAATATCGGGATGCAAGGTTCTGATTACATCTAGAAATGAATTTCCAAAATTTGGTTCTACATATAACTTGAAATTGTTGAGTGAAGAAGATGCCAAGACTCTTTTCCGTCATTCAGCAATCCCTGAGGATGGGAGTGGTTCTTCCATGCCCGGTGAAGACCTTGTGAATACGATAGTGAGGCGCTGCAAGGGATTTCCACTGGCCCTGGAAGTGGTTGGCAGATCGCTCCATGGGCAGCCTGTAGAGATCTGGAGAAGCACACTGATGAAATTATCTGAAGGTCAATCCATTGTCAATTCTGAAGATGAACTGCGTAATTGTCTTCAGAGTAGCTTAGATGCCCTTGATGACAAGGATATTATGCTGAAGGAGTGTTTTATGGACTTGGGCTCATTTCCTGAAGACCAAAAAATCCCTGCCACTGCTCTTATAGATATGTGGGCGGAATTGCACAAACTAGATAAAGACGGCATTTATGCCATTTCCAACCTTCAGAAACTCTGCTCTCGGAATCTGCTTAATCTTGTGGTCACAAGGAATGATGCAAATGAGATTGATTGGTGCTACAATGATGCCTTTGTCATGCAGCATGATCTTCTCAGGGATCTAGCCATTTATCAGAGCAACCAGGAGCCCATAGAAAAGAGGAAAAGACTAATCGTGGACTTGACAGGAAACAGACTCCCCGAGTGGTGGACTAAAGAAAATCAGCCCCAATTAAGTGCTCGTCTTGTGTCCATCTCCACAGATGAAATGTTCTCCTCAAGCTGGTGCAACATGCAACTTCCTGAAGCTGAGGCTCTAATACTGAACTTCAATCAGACAGAAAATAAATACGAATTGCCAGAGTTCATGAAGCAAATGGATAAACTGAAGGTTCTAGTAGTAACAAATTATGGTTTCTGTGCTGCTGAATTGACTAATTTTTCAGTTCTCAGTTCCTTATCCAATCTAAAGAGAATCAGGTTAGAGCAAGTTTCAATTCCAACACTATGCAACACGAGTATGGAATTGAAGAATCTGGAAAAGCTATCCTTAGTCATGTGTCATAAGATTGGTCAGGCTTTTGCAAGTAGTACCATCCAGATCCCAGAAATGTTACCAAACCTTAGGGAAATCAACATTGATTACTGTAATGACTTGGTGGAATTACCAGAAGGGTTTTGTGACTTAGTCCAGCTGAATAAGCTGAGCATCAGCAACTGCCATAAGCTGTCTGCACTGCCGGAAGGGATAGGGAAGCTTGCAAATCTGGAAGTGCTAAGGGTTAGTGCCTGTACATTGGTGTCAAAATTGCCAGACTCAATGGGAAGCCTCCACAAGTTGAGCGTTCTTGATATAACTGGTTGTTTACGAATAAGGAAAATGCCGAAACAAATAGGGGAGTTGCGTGGTCTAAGAGAGCTCCACATGAGAAGGTGCCCAGGTTTGCGCGAGCTGCCACCATCAGTGACGCTTCTCGTGGATTTGGAGAGGGTAATCTGCGATGAAGAGACTGCCCAGCTGTGGGAATGTTATACGCACTTGCTCCCCAATCTCACCCTATCAGTGCCTGAAGAAATTATCAACTTGAATTGGCTTTAA 2448 0.4383 MALELVGGAALGAVFEKLFAAVEDARTKATKFDSSLKKLEETLKSINPSILEMKRMNDQLDRSKEDMEKLIQILKDGEKLIHKCSKVSCCNYFKKWRYANEIEALEDSLLKIFQVELQAQLSRNNMQILVLLKSNRFSWSNKGVSVKYESLGSCEATDPPAFMVGLDVPLKELKRWLFTDGESRIVVSAPGGCGKTTLAKRLCHDQQVKEYFQHIFYVTVSKTFNLIGIIKKLFWHSDEQVPGFQNEEDAVNQLELMLKRKVESGRLLLVLDDVWSGSESFLTKFNFQISGCKVLITSRNEFPKFGSTYNLKLLSEEDAKTLFRHSAIPEDGSGSSMPGEDLVNTIVRRCKGFPLALEVVGRSLHGQPVEIWRSTLMKLSEGQSIVNSEDELRNCLQSSLDALDDKDIMLKECFMDLGSFPEDQKIPATALIDMWAELHKLDKDGIYAISNLQKLCSRNLLNLVVTRNDANEIDWCYNDAFVMQHDLLRDLAIYQSNQEPIEKRKRLIVDLTGNRLPEWWTKENQPQLSARLVSISTDEMFSSSWCNMQLPEAEALILNFNQTENKYELPEFMKQMDKLKVLVVTNYGFCAAELTNFSVLSSLSNLKRIRLEQVSIPTLCNTSMELKNLEKLSLVMCHKIGQAFASSTIQIPEMLPNLREINIDYCNDLVELPEGFCDLVQLNKLSISNCHKLSALPEGIGKLANLEVLRVSACTLVSKLPDSMGSLHKLSVLDITGCLRIRKMPKQIGELRGLRELHMRRCPGLRELPPSVTLLVDLERVICDEETAQLWECYTHLLPNLTLSVPEEIINLNWL* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1032 815 Gene3D Ribonuclease Inhibitor 492 813 IPR032675 -
Vvi7g1032 815 Gene3D - 145 303 IPR027417 -
Vvi7g1032 815 Coils Coil 50 73 - -
Vvi7g1032 815 Gene3D - 399 491 IPR036388 -
Vvi7g1032 815 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Vvi7g1032 815 SUPERFAMILY L domain-like 484 784 - -
Vvi7g1032 815 Pfam NB-ARC domain 170 399 IPR002182 GO:0043531
Vvi7g1032 815 Gene3D - 314 398 IPR042197 -
Vvi7g1032 815 PRINTS Disease resistance protein signature 725 741 - -
Vvi7g1032 815 PRINTS Disease resistance protein signature 184 199 - -
Vvi7g1032 815 PRINTS Disease resistance protein signature 350 364 - -
Vvi7g1032 815 PRINTS Disease resistance protein signature 261 275 - -
Vvi7g1032 815 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 815 IPR039203 GO:0050832
Vvi7g1032 815 Coils Coil 22 42 - -
Vvi7g1032 815 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 137 IPR008808 -
Vvi7g1032 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 417 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1032 Vvi-Chr7 14675185 14678320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1032 192 746 WRKY Transcription Factor Family AT5G45050 23.693 2.73e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1032 - - vvi:100853252 1614.74