Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1031 ATGGATTCCCAAAATTTGGACGAAGAGAAGTGGAAACTTCGTGTGTACCTTCAGGCTGAAGATGCGTCATTTCTGGTCACTTACTCTCCAAAACACGCTAAGAAAAGGGGGGAAAGCAGAGTGTGGTTTCGAAGCTGTTATTTCACACCGAGTAATGATCTTGTGAGGAAGGGGATAGTGAGACACTGCAAGAGACTTCCACTGGCCCTGGAAGTGGTTGGCAGATCACTCCATGCGCAGCCTGTAGAGGTCTGGAGAAGCCGACTGATGAAATTATCTGAAGGTCAATCCGTTATCGATTCCGAAGCTGATCTGCGTAAATGTTTCCAAAGTAGCTTAGACGCCCTAAATGACGAGGATGTTATGCTGAAGGAGTGTTTTTTGGACTTGGGCTCCCTTCCTGAAGGCCAGAAAGTCCCTGCCACTGCTCTTATAGATAAAGATGGGGTTGATGCCATTGCCAACCTTCAAAAACTCTCCTCCTGGAGTCTGCTTAATCTTGTGGTCACGAGCAAACACAAAACTCCTTATTTTGGGGGTTGTGGTGAGGAGATACTGATGTCTGCGGAGCTTGTTGGAGGGTCTGCTTTGGGAGCAGGATTTGGGAAGTTGATCACGGCGGTTCTAGATGCACGGAAGAAGATAACTCAGTTCGACTCCAGCCTCAAAAAACTCGAAGAGAGACTCAATTCCATAACTCCTAGTATCGTAGAGGTGAAAAAGTTCATGGACCAGTCGAATCATCCAAGGGTGGAATTGGAGAAGTTAATCCAAATCTTAAAAGATGGGGAGAAGCTAATCCACAAGTGCTCCGAGGTCTCTAGTTGCGACTACTTCAATAATTGGAGGTACGCCAATAAAATTAAGGCCTTGGATGGCTCAATTGAAAAATTTTTTCAGGTGGAAATGCAAGTCATACAACTTTGGAGCACCACGGTCCTGCCCAAATCAAATAGATTGAGTTTCAGTAACAGAGGGGTTTCCGATAACTATGAAAGTTTGGGTTCCTGTGAGGCTACTGATCCGCCGGCTTTTATGGTGGGACTAGATGTGCCTCTCAAAGAATTGAAGAGGCGGCTGTTTACGGATGGGGAATCAAGGATTGTGGTGTCGGCTCCTGGAGGATGTGGGAAAACCACTTTGGCTAAAAGGCTTTGTCACGACCAACAAGTCAAGGAATATTTTACGGACATTTGCTATGTCACGGTGTCAAAAACATGCGACCTAATTGGCATCATCAAGAAACTATTTTGGCATAATGCTGAACGAGTGCAGGGGTTTCAAAGTGAGGAAGATGCAGTCAACCAATTGGAACTAATGCTGAAGAGGAAAGTAGAATCTGGTCGTATACTGTTGGTCCTAGATGACGTTTGGTCTGGGTCGAAATCTGTCCCAGACAAGTTTAAGTTCCAAATATCGAAATTCAAGGTTCTGGTTACATCTAGAAATGAATTTCCAGGATTTGGTTCTACATATAACTTGAAATTGTTGAATGAAGAAGATGCCAAGACTCTTTTTTGTCACTCAGCAATCCCTGAGGATGGGATGCCCAGTGAAGAACTTGTGAATGGGATAGTGAGGCGCTGCAAGGGATTTCCACTGGCCCTGGAAGTGGTTGGCAGATCTCTCCATGAGCAGCCTGTAGAGATCTGGAGAAGCACACTGATGAAATTATCTGAAGGTGAATCCATTGTCAATTCTGAAGATGAACTGCGTAATTGTCTTCAAAGTAGCTTAGATGCCCTTGATGACAAGGATATTATGCTGAAAGAGTGTTTTATGGACTTGGGTTCATTTCCTGAAGACCAAAAAATCCCTGCCACTGCTCTTATAGATATGTGGGCAGAATTGCACAAACTAGATAAAGGCGGCATTTATGCCATTTCCAACCTTCACAAACTCTGCTCTCGGAATCTGCTTAATCTTGTGGTCACAAGGTCCTCCAGGAATGATGCAAATGAGATTGATTGGTGCTACAACGATGCCTTTGTCATGCAGCATGATCTTCTCAGGGATCTAGCCATTTATCAGAGCGAACAGGAGCCCATAGAAAAGAGGAAAAGACTAATCGTGGACTTGACAGGAAACAGACTCCCCGAGTGGTGGACTAAAGAGAAGCAACCCCGATCAAGTGCTCGTCTTGTGTCCATCTCCACAGATGAAATGTTCTCCTCAAGCTGGTGTAGCATGCAACTTCCTGAAGCTGAGGCTCTAATACTGAACTTTAATCAGACAGAAAAGAAATACGAATTGCCAGAGTTCATGAAGCAAATGGATGAACTGAAGGTTCTAGTAGTAACAAATTATGGTTTCTGCACTGCTGAATTGACTAATTTTTCAGTACTTGGTTCCTTATCCAATCTAAAGAGAATCAGGTTAGAGAAAGTTTCAATTCCAACACTATGCAAAACCAGTATAGAATTGAAGAATCTGGAGAAGCTATCCTTAGTTATGTGTCATAAGATTGGTCTGGCTTTTGCAAGTATACCATCCAGATTCCAGAAATGTTACCAAACCTTAGGGAAATCAACATTGATTACTGTAATGACCTGGTGGAATTACCAGAAGGGTTTTGTGATTTAA 2583 0.4355 MDSQNLDEEKWKLRVYLQAEDASFLVTYSPKHAKKRGESRVWFRSCYFTPSNDLVRKGIVRHCKRLPLALEVVGRSLHAQPVEVWRSRLMKLSEGQSVIDSEADLRKCFQSSLDALNDEDVMLKECFLDLGSLPEGQKVPATALIDKDGVDAIANLQKLSSWSLLNLVVTSKHKTPYFGGCGEEILMSAELVGGSALGAGFGKLITAVLDARKKITQFDSSLKKLEERLNSITPSIVEVKKFMDQSNHPRVELEKLIQILKDGEKLIHKCSEVSSCDYFNNWRYANKIKALDGSIEKFFQVEMQVIQLWSTTVLPKSNRLSFSNRGVSDNYESLGSCEATDPPAFMVGLDVPLKELKRRLFTDGESRIVVSAPGGCGKTTLAKRLCHDQQVKEYFTDICYVTVSKTCDLIGIIKKLFWHNAERVQGFQSEEDAVNQLELMLKRKVESGRILLVLDDVWSGSKSVPDKFKFQISKFKVLVTSRNEFPGFGSTYNLKLLNEEDAKTLFCHSAIPEDGMPSEELVNGIVRRCKGFPLALEVVGRSLHEQPVEIWRSTLMKLSEGESIVNSEDELRNCLQSSLDALDDKDIMLKECFMDLGSFPEDQKIPATALIDMWAELHKLDKGGIYAISNLHKLCSRNLLNLVVTRSSRNDANEIDWCYNDAFVMQHDLLRDLAIYQSEQEPIEKRKRLIVDLTGNRLPEWWTKEKQPRSSARLVSISTDEMFSSSWCSMQLPEAEALILNFNQTEKKYELPEFMKQMDELKVLVVTNYGFCTAELTNFSVLGSLSNLKRIRLEKVSIPTLCKTSIELKNLEKLSLVMCHKIGLAFASIPSRFQKCYQTLGKSTLITVMTWWNYQKGFVI* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1031 860 Gene3D - 330 485 IPR027417 -
Vvi7g1031 860 Gene3D - 497 583 IPR042197 -
Vvi7g1031 860 Gene3D - 35 116 IPR042197 -
Vvi7g1031 860 Coils Coil 208 228 - -
Vvi7g1031 860 Gene3D Ribonuclease Inhibitor 683 843 IPR032675 -
Vvi7g1031 860 SUPERFAMILY L domain-like 666 836 - -
Vvi7g1031 860 Pfam NB-ARC domain 353 579 IPR002182 GO:0043531
Vvi7g1031 860 Gene3D - 200 305 IPR036537 GO:0007166
Vvi7g1031 860 PRINTS Disease resistance protein signature 529 543 - -
Vvi7g1031 860 PRINTS Disease resistance protein signature 444 458 - -
Vvi7g1031 860 PRINTS Disease resistance protein signature 806 822 - -
Vvi7g1031 860 PRINTS Disease resistance protein signature 367 382 - -
Vvi7g1031 860 ProSiteProfiles RPW8 domain profile. 186 337 IPR008808 -
Vvi7g1031 860 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 189 308 IPR008808 -
Vvi7g1031 860 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 187 828 IPR039203 GO:0050832
Vvi7g1031 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 596 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1031 Vvi-Chr7 14664286 14668747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1031 375 689 WRKY Transcription Factor Family AT5G45050 24.773 4.37e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1031 - - vvi:100264286 1309.66