Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1026 ATGGCTTTGGCGCTTTTTGGAGGGGCTGCTCTGGGAGCAGCATTTCAGGGTTTGCTAACGGCGGTCATAAAAGTAAGTAAAAAGTTTGCCGGGTTCGACTCCATCCTCAAAAAACTCGAAGCCACACTCGAACGCATAAAGCCATATATTCAAGAGATGGAAAGGTTGAACGACGAGTTGGATCGTCCAAGGATGGAAATGGAGAAGTTGATCCAAATCTTACAAGATGGAGAGAAGCTAATCCAAGACTGCTCTCGCTGCTACTGCTACCAGAGGATAGGGTACGCCAATAAAATTAAAGCCCTCGATGCCTCTCTTCTTAGATTGTTTCAGGTGGATGTGCACGCCCAAGTCAGTAGGGACGTCAAGGAGATTCTGGCCATTCTCAAATCAAATGGATGCAATTGGAATTACAGAGGGGTTTCCGATGAACATGAAAACTTGGGTTCCTGCAACGCTCCTGGTCCACCGGAATTTATGGTGGGATTAGATGTGCCTCTCAAAGAATTGAAGCGGCGGCTATGTGAGGATGGGGAATCAAGGATTGTGATCAGGGCTCCTGGAGGATGTGGGAAAACCACTATGGCTAAAGAGCTTTGTCACGACAATCAAGTCAGAGAATATTTTAAGCACATTTTGTATGCCACGGTGTCAAGACCGCCCAACCTAATTGCCATCATTACGAAACTATTTTGGGACGAGGATGAACGAGTGCCAAAGTTTCAAAATGAGGAAGATGCAGCCAATCAAATGGAACTGAAACTGAAGAAGAAAGAAGAATCCGGTGATGTACTGTTGGTCCTAGATGATGTTTGGTGTGGATCAGAATCCCTCTTAGCCAAGTTCAAGTTCCGGACATCAAAATCCAAGGTCGTCGTTACATCAAGAAATGAATTTCCAGAATTTGGCTCTACATATGACTTGGAATTGTTGAATGACGACGATGCCATGGCTCTTTTTCGTCACTCAGCAATCCCCCAGAATGGAAGCTGTAATTACACACCGACTGATAGGCTTGTGAAGAAGATAGTGGGGCACTGCAAGGGAATTCCACTGGCCCTGGAAGTCGTTGGCAGATCACTCCATGGGCGGCCTGTAGAGATCTGGAGAAGCCGACTGAAGAAATTATCCGAAGGTCAATCCATTGTCAATTCTGAAATTATTCTGCGTAAATGTCTTCAAAGTAGCATAGACGCCCTAAATGACGAGGATGTTATGCTGAAGGAGTGTTTTATGGACTTGGGCTCCTTTCCTGAAGACCAGAAAATCCCTGCCACTGCTCTTATAGACATGTGGGCGGAATTGTACAACCTAGATAAAGACGGGATTGATGCCATTGCCAACCTTCACGAACTCTCCTCTCGGACTCTGCTTAATCTTGCGGTCACGAGGAATGATGCAAGTGAGATTGATGGATGGTACAGCGATGCCATTGTGATGCAGCATGATTTTCTCAGGGATCTAGCCATTTACCAGAGCGAACAGGAGCTCATAAAAGAGAGGAAAAGACTATTTGTGGACTTTAGCAAACTCCCCGAGTGGTGGACTGAAGAAGAGCAACCCCGATCAAGTGCTCGCCTTGTGTCCATCTCTACAGTCCGACTGAATAAGCTGAGCATCAGCAACTGCCCTAAGCTGTCTGCACTGCCGGAAGGAATAGGGAAGCTTGCAAATCTGGAAGTGCTAAGGCTTCGTGCCTGTGCACGGGTGTCAAAATTGCCAGACTCAATCGGAAGCCTCCACAAGTTGAGCTTTCTTGATATAACTGGTTGTGTACGACTGTCGGAAATGCCGAACCGAATAGACGGGTTGCGTGATCTAAGAGAGTTCCACATGAGAAGGTGCCCTGGTTTGTTCGAGCTGCCATCATCAGTGAAGGATCTCGTGGATTTGGAGAGTGTAATATGCGATGAAAGTACTGTCCTGCTGTGGGAATCTTTTAAGCACTTCCTCCCCAATCTCACCCTATCAGTGCGTGAAGAAAGTATCAACTGGCATTTGCTATAA 2007 0.4644 MALALFGGAALGAAFQGLLTAVIKVSKKFAGFDSILKKLEATLERIKPYIQEMERLNDELDRPRMEMEKLIQILQDGEKLIQDCSRCYCYQRIGYANKIKALDASLLRLFQVDVHAQVSRDVKEILAILKSNGCNWNYRGVSDEHENLGSCNAPGPPEFMVGLDVPLKELKRRLCEDGESRIVIRAPGGCGKTTMAKELCHDNQVREYFKHILYATVSRPPNLIAIITKLFWDEDERVPKFQNEEDAANQMELKLKKKEESGDVLLVLDDVWCGSESLLAKFKFRTSKSKVVVTSRNEFPEFGSTYDLELLNDDDAMALFRHSAIPQNGSCNYTPTDRLVKKIVGHCKGIPLALEVVGRSLHGRPVEIWRSRLKKLSEGQSIVNSEIILRKCLQSSIDALNDEDVMLKECFMDLGSFPEDQKIPATALIDMWAELYNLDKDGIDAIANLHELSSRTLLNLAVTRNDASEIDGWYSDAIVMQHDFLRDLAIYQSEQELIKERKRLFVDFSKLPEWWTEEEQPRSSARLVSISTVRLNKLSISNCPKLSALPEGIGKLANLEVLRLRACARVSKLPDSIGSLHKLSFLDITGCVRLSEMPNRIDGLRDLREFHMRRCPGLFELPSSVKDLVDLESVICDESTVLLWESFKHFLPNLTLSVREESINWHLL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1026 668 Gene3D Ribonuclease Inhibitor 502 663 IPR032675 -
Vvi7g1026 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 414 IPR027417 -
Vvi7g1026 668 ProSiteProfiles RPW8 domain profile. 1 148 IPR008808 -
Vvi7g1026 668 Gene3D - 310 395 IPR042197 -
Vvi7g1026 668 PRINTS Disease resistance protein signature 578 594 - -
Vvi7g1026 668 PRINTS Disease resistance protein signature 181 196 - -
Vvi7g1026 668 PRINTS Disease resistance protein signature 258 272 - -
Vvi7g1026 668 PRINTS Disease resistance protein signature 347 361 - -
Vvi7g1026 668 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 133 IPR008808 -
Vvi7g1026 668 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 532 IPR039203 GO:0050832
Vvi7g1026 668 Gene3D - 141 300 IPR027417 -
Vvi7g1026 668 SUPERFAMILY L domain-like 482 641 - -
Vvi7g1026 668 Coils Coil 39 59 - -
Vvi7g1026 668 Pfam NB-ARC domain 167 381 IPR002182 GO:0043531
Vvi7g1026 668 Gene3D - 396 490 IPR036388 -
Vvi7g1026 668 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1026 Vvi-Chr7 14608387 14611837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1026 189 423 WRKY Transcription Factor Family AT5G45050 27.126 2.12e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1026 - - vvi:100244283 1052.74