Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1025 ATGGATAGATCGACGCTAGCACTGGGTCCTATCATGGACCTGCCGATCATGCACGACAGTGACCGGTACGATTTCGTCCGAGATATCGGTTCAGGAAATTTCGGAATCGCGAGATTGATGAGAGATAAGCTCACTAAAGAGCTCGTTGCCGTCAAATACATCGAGAGAGGTGATAAGATTGATGAAAATGTTCAAAGGGAAATAATTAATCATAGGTCTCTCAGGCACCCCAACATTGTTAGGTTTAAAGAGGTCATATTAACACCAACCCATCTAGCTATTGTGATGGAATATGCTGCTGGTGGAGAGCTTTTTGAACGTATATGCAAGGCAGGGCGCTTCATTGAGGATGAGGCTCGCTTTTTCTTTCAACAGCTTATATCAGGGGTCAGCTATTGTCATGCAATGCAAATATGTCACCGGGACTTGAAGTTGGAAAATACTTTGTTGGATGGAAGCCCAGCTCCACGTTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCGGTGCTTCATTCACAACCAAAATCAACTGTTGGAACTCCTGCATACATTGCTCCAGAAGTATTAATGAGGCAAGAATACGATGGCAAGATTGCAGACGTGTGGTCATGTGGGGTAACATTATATGTTATGCTTGTTGGTGCATATCCTTTTGAGGATCCTGATGAACCCAAGGACTTCCGAAAAACAATACAAAGAATTCTCAGTGTTCAGTATTCCATTCCAAGCTCTGTTCAAATATCTACCGAGTGTCACCACCTGATCTCAAGGATATTTGTTGCTGACCCTGGAGCGAGGATTACAATTCCGGAAATCAAGAATCATGAGTGGTTTCTGAAGAACCTCCCTGCAGACCTCATGGATGAGAAGACAATAGGAAACCAGTTTGAAGAGCCTGATCAACCCATGCAGAGTCATGATGAGATCATGGGGATAATTTCTGAGGCCACTGTACCAGCACCAGGGGTCTATGGCCTTAATAGCTACATGACGGATGGCTTAGACATGGATGATGACATGGACTTGGAAAACGATTCAGACATCGATGTAGATAGCAGTGGAGAGGTAGTGTATGCAATGTGA 1086 0.4392 MDRSTLALGPIMDLPIMHDSDRYDFVRDIGSGNFGIARLMRDKLTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAAGGELFERICKAGRFIEDEARFFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLMRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPDEPKDFRKTIQRILSVQYSIPSSVQISTECHHLISRIFVADPGARITIPEIKNHEWFLKNLPADLMDEKTIGNQFEEPDQPMQSHDEIMGIISEATVPAPGVYGLNSYMTDGLDMDDDMDLENDSDIDVDSSGEVVYAM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1025 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Vvi7g1025 361 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Vvi7g1025 361 SUPERFAMILY Protein kinase-like (PK-like) 13 310 IPR011009 -
Vvi7g1025 361 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Vvi7g1025 361 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Vvi7g1025 361 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Vvi7g1025 361 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1025 361 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1025 361 PANTHER SERINE/THREONINE KINASE 22 305 - -
Vvi7g1025 361 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Vvi7g1025 361 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1025 Vvi-Chr7 14601037 14606849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1025 22 308 CBL-interacting serine-threonine protein kinases AT4G24400 40.532 8.32e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vvi7g1025 Pkinase 8.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1025 K14498 - vvi:100240941 715.301