Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1011 ATGGAAACCCTTCTCCGATTCCTCTTGCCTCTGTTTTCTAGCCTCCTTGTAGTGGTGATTTCCATCTGCTTTTATCGATTAAAAATCAAAGCTGCTTCTAATGCAAAAAGATGCACTGCTCCTCGAGCAGGTGGGGCTTGGCCTATCATCGGTCACCTGCACCTCTTTGGTGCTCAGCAGCTGACCCACAAGACACTGGGAGCCATGGCCGACAAGTATGGACCGGTTTTCACTATAAGGCTTGGATTGAATGAGATTTTAGTTTTGAGCAGTAGTGAAATGGCGAGAGAGTGTTTCACTACTCATGACAGAGTCTTCTCCACACGACCAAGCGTCACTGCATCAAAAATACTGGGCTATGACTTCGCTATGTTTGGCTTTGCTCCTTATGGATCTTACTGGCGTGAGATGCGCAAAATAGTCACAATCGAGCTTCTATCAAATCACAGACTCGACATGCTCAAGCACATACGTGCTTCAGAGGTGGGGACTTCAATAAGAGAACTCTATGAGATGTGGGTCAGTGAGAGAGGCACGGATGGCAGAGTATTTGTGGATATGAAGCGATGGTTTGGAGATTTGACACTAAATTTGGCGGTGAGATTGGTGGGAGGGAAGCGCTATTTCGGCGCTGGTGCTGATACCAAGGAAGGAGAGGGACGAACCTGTCAAAAAGTGATCAGGGATTTTGCGCATCTGTTTGGGGTATTTGTGTTGTCAGATGCAATTCCATTTCTCAGTTGGTTGGACTTGAAAGGATATAAGAAAGCCATGAAGAGAACTGCTAAAGAACTGGACAGTCTATTTGGAGGGTGGCTGCAGGAGCATAAAGAGAAGAGATTGTTGGGTGGGGAAGGCAAGGATGATCAAGATTTTATGGATGTGATGCTGACAGTTCTCGAAGATGTCAACTTTTCTGGTTTTGATGCAGATACCGTTAACAAGGCTACTTGCCTGAATCTCATCTTAGCAGGAAGTGACACCACGAAGGTCACTCTTACTTGGGCCCTATCTCTACTACTCAACCACCCCCATGTGTTGAAAAAAGCTCAGGCCGAGCTGGACATCCAAGTTGGCAAGGACCGGCAGGTGGATGAATCAGATGTCAAAAACCTTGTATACCTCCAGGCTATAATCAAGGAAACGCTGCGTCTTTATCCAGCTAGCCCGATCATCACTCTTCATGCAGCAATGGAAGATTGCACCCTTGCAGCTGGCTATAACATTTCAGCTGGCACACAAATTATGGTGAATGCATGGAAAATTCACCGTGATGAGCGTGTGTGGTGCAACCCAAAAGAGTTTCAGCCAGAGAGGTTTATGACAAGCCATAAGGACACAGATGTGAGAGGTCAGCATTTTGAACTTATCCCTTTTGGCTCTGGTAGACGATCATGCCCGGGAATATCACTTGCTCTACAAGTGGTGCATTTCGCCCTGGCTAGCTTGCTACATAGTTATGAAGTAACAAAGCCATCAGACGGAGACGTGGACATGACTGAAAGCTTGGGTTTAACAAATTTGAAAGCAACCCCACTTGAAGTTCTCCTTAGTCCACGCCTCAAAGCAGAGCTTTACAGACAGTAG 1587 0.4638 METLLRFLLPLFSSLLVVVISICFYRLKIKAASNAKRCTAPRAGGAWPIIGHLHLFGAQQLTHKTLGAMADKYGPVFTIRLGLNEILVLSSSEMARECFTTHDRVFSTRPSVTASKILGYDFAMFGFAPYGSYWREMRKIVTIELLSNHRLDMLKHIRASEVGTSIRELYEMWVSERGTDGRVFVDMKRWFGDLTLNLAVRLVGGKRYFGAGADTKEGEGRTCQKVIRDFAHLFGVFVLSDAIPFLSWLDLKGYKKAMKRTAKELDSLFGGWLQEHKEKRLLGGEGKDDQDFMDVMLTVLEDVNFSGFDADTVNKATCLNLILAGSDTTKVTLTWALSLLLNHPHVLKKAQAELDIQVGKDRQVDESDVKNLVYLQAIIKETLRLYPASPIITLHAAMEDCTLAAGYNISAGTQIMVNAWKIHRDERVWCNPKEFQPERFMTSHKDTDVRGQHFELIPFGSGRRSCPGISLALQVVHFALASLLHSYEVTKPSDGDVDMTESLGLTNLKATPLEVLLSPRLKAELYRQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1011 528 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 CDD CYP82 74 520 - -
Vvi7g1011 528 FunFam Cytochrome P450 82C4 30 518 - -
Vvi7g1011 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vvi7g1011 528 PANTHER CYTOCHROME P450 82C3-RELATED 17 526 - -
Vvi7g1011 528 SUPERFAMILY Cytochrome P450 46 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 Pfam Cytochrome P450 41 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 Gene3D Cytochrome P450 34 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1011 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1011 Vvi-Chr7 14414843 14416964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1011 8 526 Cytochrome P450 AT4G31940 53.992 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1011 - - vvi:109122869 1039.64