Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1003 ATGGCGTTCTCTTTGTTCTCATCGCCTCAGCCACAGCAACCCCAACAGCTCTTTCAGCCTCAGCCACAGCCACAGCAACCCTTTCAACAACCCAACCCATTTTTACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAATTACAACAGCAACAGCAACAGCAATTTCAGCAGCCGCAGTTCCAGCAGCAACAACAGCAACCACTCTATCTCTTCACTAACGACAAGGCTCCTGCGACTTACAGCACCAAGTGGGCCGATCTCCACCCCGACTCCCAGAAATTTCTCCTCCAGATCGAGGAGCGGATACTGGAGTATAGAGATGAAAGCCAGAGGTTGGATCAGTGTGGTCGTCTTTATGATTCTTCTGTATCCAACGATGCATTTGAGCTTGATGCAAGTCGCATTGTTCAGGAACTTGGGGGAGTCAGTACTGCCATGGAGCGACAGAAGGCTGTGTTGCAAGAATTGATGGCTGTTGTGAAGGATATGTTAAGAAACACAGAGGTTGCTGTTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCAGGTTCTGGAGCTGTTTCAAGTGCCCCTGCACCATCACAGGCCCCGGGGGCAACTGTGGTTCCTAGTGCAAGCAGTCAACTGACTGTTACCTCCATGGCACCAGTTTTTGATTTCTACAGTGGGCTCCCGAGGAAACCATCTCCATTTTTGCTGCAAACAGTTGCTAGATTTGAGAAGTATCTTGGTGAATGCCGGCAGTGGATTGAAGAGTTAGAGCAGCTACTCATAGATTTTGACAGGAACTCTTCCAATGGCAGTTCCTCGTTACTGCAGTCTCTTCCAAAAGTCATGTCAAATGTGCATGACTTTTTTGTTCATGTAGCTGCTAAGGTAAAGAAAACATTTTTGTTTTTTAAAACCTCAATTATATAG 924 0.4708 MAFSLFSSPQPQQPQQLFQPQPQPQQPFQQPNPFLQQQQQQQQQQQLQQQQQQQFQQPQFQQQQQQPLYLFTNDKAPATYSTKWADLHPDSQKFLLQIEERILEYRDESQRLDQCGRLYDSSVSNDAFELDASRIVQELGGVSTAMERQKAVLQELMAVVKDMLRNTEVAVRSFMMLRPRFLHPGSGAVSSAPAPSQAPGATVVPSASSQLTVTSMAPVFDFYSGLPRKPSPFLLQTVARFEKYLGECRQWIEELEQLLIDFDRNSSNGSSSLLQSLPKVMSNVHDFFVHVAAKVKKTFLFFKTSII* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1003 307 MobiDBLite consensus disorder prediction 15 29 - -
Vvi7g1003 307 Gene3D - 229 298 - -
Vvi7g1003 307 MobiDBLite consensus disorder prediction 1 49 - -
Vvi7g1003 307 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 296 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Vvi7g1003 307 SUPERFAMILY beta-sandwich domain of Sec23/24 10 93 - -
Vvi7g1003 307 Coils Coil 146 166 - -
Vvi7g1003 307 MobiDBLite consensus disorder prediction 30 49 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1003 68 304 NAC Transcription Factor Family AT4G37130 69.295 1.23e-114 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1003 K14307 - vvi:100253561 444.121