Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0996 ATGTCTCCAGAGTATGCAATTGATGGCAAATTCTCGCTAAAATCCAACGTCTTCAGTTTTGGTGTGCTTTTGTTGGAGATAGTGAGTAGTAAAAAGAACAGGGGTTTTTGTCATCCAGATCGCCTCCACAATATTTTGGGACATTTAGCATGGCTGCTTTGGAATGAAGGTAAGACCATGGAATTGATGGATGCATGCCTGAAGGATTCATGTGTTGAGTCTCAAGTACTAAGATGCATTCAAGTGGGCTTATTATGCATTCAAAAACTCCCAATAGACAAGCCAACAATGTCATCTATAATTTTCATGTTGGGTAACGAGAAAGCAATGTTGCCTCAACCTAAACATCACAGTTTCTTCATTGAAAGAAGCTCTGAAGGAGATGACAAAGGATGTTACACATAA 405 0.3926 MSPEYAIDGKFSLKSNVFSFGVLLLEIVSSKKNRGFCHPDRLHNILGHLAWLLWNEGKTMELMDACLKDSCVESQVLRCIQVGLLCIQKLPIDKPTMSSIIFMLGNEKAMLPQPKHHSFFIERSSEGDDKGCYT* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0996 134 FunFam Uncharacterized protein 1 113 - -
Vvi7g0996 134 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Vvi7g0996 134 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 120 - -
Vvi7g0996 134 Pfam Protein tyrosine and serine/threonine kinase 1 33 IPR001245 GO:0004672|GO:0006468
Vvi7g0996 134 SUPERFAMILY Protein kinase-like (PK-like) 1 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0996 Vvi-Chr7 14158036 14158523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0996 1 130 Receptor kinase-like Gene Family AT4G23150 46.154 2.29e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi7g0996 PK_Tyr_Ser-Thr 1.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0996 - - csin:114268583 207.223