Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0991 ATGGCTGTTCCAGAAGTCAATAAGGAATTTCTTGGGGAACTTGAAGCGATGGGATTCCCTGTAGCCAGAGCAACAAGGGCGCTTCATTTTTCTGGTAATGACAGTCTGGCAGCTGCTGTAAGTTGGATTATTGATCATGAAAATGACCCAGACATTGATCAGATGCCCTCGATAACAGTCGACATTGGTATTGAGTCTCCTAAACCATTTCAGATTTCTGAAGAAATGAAGAAAAAGGCACAAGAATTAAGAAATCGAGCACGCAGAAGGCAAGAAGAAGAAGAAAAGAAACGGGAAAGAGAAAGGGAGAAGAATAGGATTCGGGCTGGAAAGGAACTCCTTGAAGCAAAACGAATTGATGAAGAAAATGAACGAAAACGTATGTTAGCCTATTGGGAATCAGAGAAAGAGGAACAGAAAAGAGCAAGGGAGAAACTTCTCAAGAAATTAATGGAAGACAAGGCTGAAAGAAGAAGCAAGCTTGGATTGCCACCTGAAAACCCTGCTAGTGTAAAAACTTCCTTGCCTGTTGTACTGGAAAAGAACTCATTGTTCACTAAACTTGATACAAAGGCAGAGCCCTTGAGAGAATGTTTAAGGTTTCTCAAAAAAAGTCACAAGAATGATGATGCCAGAGTGAAAAGGGCCTTCCAAACTCTTCTGATTTATATCAGAAATGTTGCTAAGCATCCTGATGAGGAAAAGTTCCGGAAGATCCGATTTAGTAACCCAGCCTTCCAGGAAAGGGTTGGGAGTTTGACAGGAGGTATTGAGTTTCTCGAGCTTTGTGGGTTTGAGAGAACTGAAGACGGTGAATTCTTATTTCTACCTCAGGAGAAGGTTGACATGGCAGTCTTGAATTCAGCTGGATCTGTGTTGAACTCTGCAATGACAAACCCCTTCTTTGGAGTTTTTTCAAGTTGA 924 0.4156 MAVPEVNKEFLGELEAMGFPVARATRALHFSGNDSLAAAVSWIIDHENDPDIDQMPSITVDIGIESPKPFQISEEMKKKAQELRNRARRRQEEEEKKREREREKNRIRAGKELLEAKRIDEENERKRMLAYWESEKEEQKRAREKLLKKLMEDKAERRSKLGLPPENPASVKTSLPVVLEKNSLFTKLDTKAEPLRECLRFLKKSHKNDDARVKRAFQTLLIYIRNVAKHPDEEKFRKIRFSNPAFQERVGSLTGGIEFLELCGFERTEDGEFLFLPQEKVDMAVLNSAGSVLNSAMTNPFFGVFSS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0991 307 PANTHER F13M7.16 PROTEIN 1 304 - -
Vvi7g0991 307 Coils Coil 73 110 - -
Vvi7g0991 307 Gene3D - 8 53 - -
Vvi7g0991 307 MobiDBLite consensus disorder prediction 82 104 - -
Vvi7g0991 307 SUPERFAMILY UBA-like 4 56 IPR009060 GO:0005515
Vvi7g0991 307 SMART uba_6 7 45 IPR015940 -
Vvi7g0991 307 CDD UBA_PUB_plant 5 53 - -
Vvi7g0991 307 Pfam PUB domain 212 282 IPR018997 -
Vvi7g0991 307 SUPERFAMILY PUG domain-like 206 301 IPR036339 -
Vvi7g0991 307 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Vvi7g0991 307 CDD PUB_UBA_plant 199 304 - -
Vvi7g0991 307 SMART PGNneu 215 278 - -
Vvi7g0991 307 Gene3D - 198 296 - -
Vvi7g0991 307 Coils Coil 129 156 - -
Vvi7g0991 307 Pfam UBA/TS-N domain 12 43 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0991 Vvi-Chr7 14025102 14037461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0991 1 305 C2H2 Transcription Factor Family AT1G04850 65.584 3.63e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0991 K24348 - vvi:100264566 560.451