Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0965 ATGGAAAGCAGCATGTGCCTTAGCAGTGCAATTTTGTCTCTGTGTTTGTCATGTATGTGGTTGGGAGTAGTGCCTTCCATTTCTAGTGCACAGACAGACACCATCAAACCTGGGGAAGAGCTTCAATTCTCGGAAAAATTACTGGTTTCTGCAAAAGGGACTTTTACTCTAGGCTTCTTCAGCCTGGAATCTGGCAGTTATTTAGGAATATGGTACACAACTGATGATTATCACAAGAAAGTTTGGGTTGCTAACAGAGACAAGGCTATATCCGGCACCGATGCAAATCTCACGCTGGATGCCGATGGCAAATTGATGATCACGCATAGTGGGGGTGATCCAATTGTCCTGAATTCCAATCAAGCAGCCAGAAACTCAACAGCTACTCTGCTTGATTCTGGAAATTTTGTTTTGGAAGAGTTCAATTCGGATGGATCTCTGAAGGAGAAACTATGGGCGAGTTTCGATAATCCTACAGACACCCTCCTGCCTGGGATGAAACTAGGCATCAACTTGAAAACCGGGCGAAACTGGTCACTTGCTTCATGGATAAGCGAACAAGTGCCTGCTCCTGGGACTTTTACTCTGGAATGGAATGGCACACAATTGGTGATGAAACGCCGAGGGGGCACCTACTGGAGCAGTGGAACCTTGAAAGATAGGAGCTTTGAGTTCATTCCTTGGTTGATGAGCTCTGACACTTTCAATAACATCTACAGTTTTAACAGTGTTTCGAATGCAAACGAGATTTACTTTAGCTATTCAGTTCCAGAAGGAGTTGTTTCAGACTGGGTATTGACCTCGGAAGGGGGACTTTTTGACACTAGTAGACCCGTATTTGTGCTGGACGATCAGTGCGCTAGGTATGAAGAATATCCAGGGTGTGCAGTGCAAAACCCACCCACTTGCAGGTCTAGAAAAGACGGATTCATGAAGCAATCGGTTCTCATATCAGGATCACCATCATCAATAAAAGAAAAATCGAGCTTGGGCCTTAGGGATTGTAAGGCTTTATGCTGGAATGATTGTTCTTGTACTGCTTATAATAGTTTATACACTAACGGAACTGGATGTCGGTTTTGGAGTACAAAATTTGCACAAGCCCTCAAGGATGACGCAAATCAGGAGGAGCTCTATGTTTTATCCTCATCACGAGTTACGGGTAAGAGGGAGAGAGAAATGGAGGAAGCTGCGCTGCTTGAATTGACAACTTCAAACAGCTTTAGTGATTCAAAAGATGTTGAACATGATGGAAAGAGGGGGGCTCATGATCTTAAACTGTTCAGTTTTGATTCTATTGTGGCTGCCACGAATAACTTTTCATCTGAAAATAAACTTGGAGAGGGTGGTTTTGGCCAGGTTTATAAAGGGAAATTACCTGAGGGGCAAGAAATAGCAGTGAAGAGACTTTCAAGGGGCTCCAGCCAAGGATTGGTGGAGTTTAAAAATGAGATTAGACTGATCGTCAAACTCCAACACATGAATCTTGTTAGACTTCTGGGTTGCTGCATCAAGGGAGAAGAAAAGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTGGACTTCTTCCTCTTTGATCCTGCTAGAAGAAAGATATTGGACTGGAAAAGACGTCACAATATCATTGAGGGGATTGCACAAGGACTTCTTTACTTGCATAAATATTCAAGACTAAGAATTATTCATAGAGATCTAAAAGCAAGTAACATCCTACTTGATCATGACTTGAACCCGAAAATTTCTGATTTTGGCATGGCCAGAACTTTTGGGCGAAATGCATCGGAAGCAAATACAAATAGGATAGTTGGAACATATGGTTACATGCCACCCGAGTATGCCATGGAAGGAATTTTCTCGGTGAAATCAGATGTTTATAGCTTTGGGGTCCTACTGTTGGAGATTGTGAGCGGCCGAAAGAACAAAAGCTTTCATCATAACCACGGTGCCTTTGCCATAAACCTGGCAGTATACGCTTGGGATCTATGGAAAGAAGGTACTAGCTTGGAGCTAGTGGATCCAATGCTGGAGGATTCCTACTCAACAACCCAAATGTTGAGATGCATTCATATTGCTCTCTTGTGCGTACAGGAGAGCGCAGCAGATAGGCCTACAATGTCAGCTGTTATCTCCATGCTCACCAACGAAACTGTGCCCCTACCAAACCCAAATCTACCCGCATTTTCCACTCATCATAAAGTGTCAGAGCTAGATTCACACAAAGGCAGGCCAGAGAGTTGTTCTGGATATGTAACTATTTCAGAGACGGAAGGTCGGTAA 2280 0.4338 MESSMCLSSAILSLCLSCMWLGVVPSISSAQTDTIKPGEELQFSEKLLVSAKGTFTLGFFSLESGSYLGIWYTTDDYHKKVWVANRDKAISGTDANLTLDADGKLMITHSGGDPIVLNSNQAARNSTATLLDSGNFVLEEFNSDGSLKEKLWASFDNPTDTLLPGMKLGINLKTGRNWSLASWISEQVPAPGTFTLEWNGTQLVMKRRGGTYWSSGTLKDRSFEFIPWLMSSDTFNNIYSFNSVSNANEIYFSYSVPEGVVSDWVLTSEGGLFDTSRPVFVLDDQCARYEEYPGCAVQNPPTCRSRKDGFMKQSVLISGSPSSIKEKSSLGLRDCKALCWNDCSCTAYNSLYTNGTGCRFWSTKFAQALKDDANQEELYVLSSSRVTGKREREMEEAALLELTTSNSFSDSKDVEHDGKRGAHDLKLFSFDSIVAATNNFSSENKLGEGGFGQVYKGKLPEGQEIAVKRLSRGSSQGLVEFKNEIRLIVKLQHMNLVRLLGCCIKGEEKMLIYEFMPNKSLDFFLFDPARRKILDWKRRHNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDHDLNPKISDFGMARTFGRNASEANTNRIVGTYGYMPPEYAMEGIFSVKSDVYSFGVLLLEIVSGRKNKSFHHNHGAFAINLAVYAWDLWKEGTSLELVDPMLEDSYSTTQMLRCIHIALLCVQESAADRPTMSAVISMLTNETVPLPNPNLPAFSTHHKVSELDSHKGRPESCSGYVTISETEGR* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0965 759 ProSiteProfiles PAN/Apple domain profile. 303 384 IPR003609 -
Vvi7g0965 759 MobiDBLite consensus disorder prediction 735 759 - -
Vvi7g0965 759 ProSiteProfiles Bulb-type lectin domain profile. 32 151 IPR001480 -
Vvi7g0965 759 Pfam Protein tyrosine and serine/threonine kinase 443 713 IPR001245 GO:0004672|GO:0006468
Vvi7g0965 759 CDD STKc_IRAK 446 715 - -
Vvi7g0965 759 SMART blect_4 39 158 IPR001480 -
Vvi7g0965 759 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 118 730 - -
Vvi7g0965 759 PIRSF SRK 384 759 IPR024171 GO:0004674
Vvi7g0965 759 PIRSF SRK 277 408 IPR024171 GO:0004674
Vvi7g0965 759 PIRSF SRK 3 279 IPR024171 GO:0004674
Vvi7g0965 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Vvi7g0965 759 Gene3D - 26 155 IPR036426 -
Vvi7g0965 759 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 185 IPR036426 -
Vvi7g0965 759 Gene3D Transferase(Phosphotransferase) domain 1 516 719 - -
Vvi7g0965 759 SMART serkin_6 440 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0965 759 FunFam Receptor-like serine/threonine-protein kinase SD1-8 27 155 - -
Vvi7g0965 759 CDD B_lectin 48 158 IPR001480 -
Vvi7g0965 759 ProSiteProfiles Protein kinase domain profile. 440 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0965 759 SMART ntp_6 305 382 IPR003609 -
Vvi7g0965 759 Pfam PAN-like domain 303 365 IPR003609 -
Vvi7g0965 759 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Vvi7g0965 759 Gene3D Phosphorylase Kinase; domain 1 413 515 - -
Vvi7g0965 759 SUPERFAMILY Protein kinase-like (PK-like) 425 734 IPR011009 -
Vvi7g0965 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 516 721 - -
Vvi7g0965 759 Pfam D-mannose binding lectin 81 183 IPR001480 -
Vvi7g0965 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 404 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0965 Vvi-Chr7 13340569 13343679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0965 423 738 Receptor kinase-like Gene Family AT4G11530 62.975 3.55e-134 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi7g0965 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0965 - - vvi:100263838 1436.01