Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0963 ATGGAAAGCAGCATGTGCCTTAGCAGTGCAATTTTGTCTCTGTGTTTGTCATGTATGTGGTTGGGAGTGGTGCCTTCCATTTCTAGTGCACAGACAGACACCATCAAACCTGGGGAAGAGCTTCAATTCTCGGAAAAATTACTGGTTTCTGCAAAAGGGACTTTTACTCTAGGCTTCTTCAGCCTGGAATCTGGCAGTTATTTAGGAATATGGTACACAACTGATGATTATCACAAGAAAGTTTGGGTTGCTAACAGAGACAAGGCTATATCCGGCACCGATGCAAATCTCACGCTGGATGCCGATGGCAAATTGATGATCACGCATAGTGGGGGTGATCCAATTGTCCTGAATTCCAATCAAGCAGCCAGAAACTCAACAGCTACTCTGCTTGATTCTGGAAATTTTGTTTTGAAAGAGTTCAATTCGGATGGATCTGTGAAGGAGAAACTATGGGAGAGTTTCGATAATCCTACAGACACCCTCCTGCCTGGGATGAAACTAGGCATCAACTTGAAAACCGGACGAAACTGGTCACTTGCTTCATGGATAAGCGAACAAGTGCCTGCTCCTGGGACTTTTACTCTGGAATGGAATGGCACACAATTGGTGATGAAACGCCGAGGGGGCACCTACTGGAGCAGTGGAACCTTGAAAGATAGGAGCTTTGAGTTCATTACTTGGTTGATGAGCCCTGACACTTTCAATAACATCTACAGTTTTAACAGTGTTTCGAATGCAAACGAGATTTACTTTAGCTATTCAGTTCCAGACGGAGTTGTTTCAGAGTGGGTATTGACCTCGGAAGGGGGACTTTTTGACACTAGTAGACCTGTATTTGTGCTGGACGATCTGTGCGACAGGTATGAAGAATATCCAGGGTGTGCAGTGCAAAACCCACCCACTTGTAGGACTAGAAAAGACGGATTCATGAAGCAATCGGTTCTCATATCAGGATCACCATCATCAATAAAAGAAAATTCGAGCTTGGGCCTTAGTGATTGTCAGGCTATATGCTGGAATAATTGTTCTTGTACTGCTTATAATAGTATATACACTAACGGAACTGGATGTCGGTTTTGGAGTACAAAATTTGCACAAGCCCTCAAGGATGACGCAAATCAGGAGGAGCTCTATGTTTTATCCTCATCACGAGTTACGGGTAAGAGGAGCAGTTGGTGGATATGGGTCATTATTGCAGGAGTGGTACTTTTGGTCTTGTTACTTACGGGCTCCTTATACTATTCAAGGAGAAAATTCAGAGGGGAAAGAGAAATGGAGGAAGCTGCGCTGCTTGAATTGGCAACTTCAGACAGCTTTGGTGATTCAAAAGATGATGAACATGATGGAAAGAGGGGGGCTCATGATCTTAAACTGTTCAGTTTTGATTCTATTGTGGCTGCCACAAATAACTTTTCACCTGAAAATAAACTTGGAGAGGGTGGTTTTGGCCCGGTTTATAAGGGGAAATTACTTGAGGGGCAAGAAATAGCAGTGAAGAGACTTTCAAGGGGCTCCAGCCAAGGATTGGTGGAGTTCAAAAATGAGATTAGACTGATTGTCAAACTCCAACACATGAATCTTGTTAGACTTTTGGGTTGCTGCATCAAGGGAGAAGAAAAGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTGGACTTCTTCCTCTTTGATCCTGCTAGAAGAAAGATATTGGACTGGAAAAGACGTCACAATATCATAGAGGGTATTGCACAAGGACTTCTTTACTTGCATAAATATTCAAGACTAAGAATTATTCATAGAGATCTAAAAGCAAGTAACATCCTACTTGATCATGACTTGAACCCCAAAATTTCTGATTTTGGCATGGCCAGAACTTTTGGGCGAAATGCATCGGAAGCAAATACAAATAGGATTGTTGGAACATATGGTTACATGCCACCCGAGTATGCCATGGAAGGAATTTTCTCGGTGAAATCAGATGTTTATAGCTTTGGGGTCCTACTGTTGGAGATTGTGAGCGGCCGGAAGAACAAAAGCTTTCATCATAACCACGGTGCCTTTGCCATAAACCTGGCAGTATACGTAAGTCTGCTATATCTCATATTTGTCTCTACATTATTTTCAACAGCACCCGGTGTATCCTTCCAAAATTTTCATACTAACCTAGTAAGTAAATCAACCCTAAAATGA 2178 0.4233 MESSMCLSSAILSLCLSCMWLGVVPSISSAQTDTIKPGEELQFSEKLLVSAKGTFTLGFFSLESGSYLGIWYTTDDYHKKVWVANRDKAISGTDANLTLDADGKLMITHSGGDPIVLNSNQAARNSTATLLDSGNFVLKEFNSDGSVKEKLWESFDNPTDTLLPGMKLGINLKTGRNWSLASWISEQVPAPGTFTLEWNGTQLVMKRRGGTYWSSGTLKDRSFEFITWLMSPDTFNNIYSFNSVSNANEIYFSYSVPDGVVSEWVLTSEGGLFDTSRPVFVLDDLCDRYEEYPGCAVQNPPTCRTRKDGFMKQSVLISGSPSSIKENSSLGLSDCQAICWNNCSCTAYNSIYTNGTGCRFWSTKFAQALKDDANQEELYVLSSSRVTGKRSSWWIWVIIAGVVLLVLLLTGSLYYSRRKFRGEREMEEAALLELATSDSFGDSKDDEHDGKRGAHDLKLFSFDSIVAATNNFSPENKLGEGGFGPVYKGKLLEGQEIAVKRLSRGSSQGLVEFKNEIRLIVKLQHMNLVRLLGCCIKGEEKMLIYEFMPNKSLDFFLFDPARRKILDWKRRHNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDHDLNPKISDFGMARTFGRNASEANTNRIVGTYGYMPPEYAMEGIFSVKSDVYSFGVLLLEIVSGRKNKSFHHNHGAFAINLAVYVSLLYLIFVSTLFSTAPGVSFQNFHTNLVSKSTLK* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0963 725 ProSiteProfiles PAN/Apple domain profile. 303 384 IPR003609 -
Vvi7g0963 725 FunFam Receptor-like serine/threonine-protein kinase SD1-8 27 155 - -
Vvi7g0963 725 SMART ntp_6 305 382 IPR003609 -
Vvi7g0963 725 ProSiteProfiles Bulb-type lectin domain profile. 32 151 IPR001480 -
Vvi7g0963 725 Gene3D Transferase(Phosphotransferase) domain 1 548 694 - -
Vvi7g0963 725 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 674 - -
Vvi7g0963 725 ProSiteProfiles Protein kinase domain profile. 472 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0963 725 FunFam Lectin-domain containing receptor kinase A4.3 548 697 - -
Vvi7g0963 725 Pfam Protein tyrosine and serine/threonine kinase 475 672 IPR001245 GO:0004672|GO:0006468
Vvi7g0963 725 SMART serkin_6 472 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0963 725 Gene3D Phosphorylase Kinase; domain 1 446 547 - -
Vvi7g0963 725 PIRSF SRK 280 699 IPR024171 GO:0004674
Vvi7g0963 725 PIRSF SRK 3 278 IPR024171 GO:0004674
Vvi7g0963 725 Pfam D-mannose binding lectin 81 183 IPR001480 -
Vvi7g0963 725 SMART blect_4 39 158 IPR001480 -
Vvi7g0963 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Vvi7g0963 725 Pfam PAN-like domain 303 365 IPR003609 -
Vvi7g0963 725 CDD B_lectin 48 158 IPR001480 -
Vvi7g0963 725 SUPERFAMILY Protein kinase-like (PK-like) 456 694 IPR011009 -
Vvi7g0963 725 Gene3D - 26 155 IPR036426 -
Vvi7g0963 725 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 185 IPR036426 -
Vvi7g0963 725 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 437 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0963 Vvi-Chr7 13285179 13287934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0963 441 681 Receptor kinase-like Gene Family AT4G05200 63.485 4.58e-105 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi7g0963 PK_Tyr_Ser-Thr 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0963 - - vvi:100263838 1332.01