Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0949 ATGAGGAAGCTTGCAAGTGCCAGTGCTGGTTCTCCAAAATCTCCAAGCTTGCAAGTGCCTGTCCTGGTTCTCAAGGATTCTTTTACTCGCGAACCGGGAATCAAGGTCCAGCATGCCAATTTCCAAGTGTCAAAAGTTGTGGCCTATGGAGCTACTATACAGGCTACAATCTTAAGCGGTGAGGGCAATGAGAAGGTCCAAGACCTACTGTTGTTGGACGTCACCCCTCTCTCCCTTGGTTCGGAGACTCCTGGTGGTGTATATCCAACTTCACCCACTACAACTGCTGCAGGAGTCAAATATTCACTTCCATAA 315 0.4857 MRKLASASAGSPKSPSLQVPVLVLKDSFTREPGIKVQHANFQVSKVVAYGATIQATILSGEGNEKVQDLLLLDVTPLSLGSETPGGVYPTSPTTTAAGVKYSLP* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0949 104 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 64 88 IPR029047 -
Vvi7g0949 104 Pfam Hsp70 protein 38 88 IPR013126 GO:0005524|GO:0140662
Vvi7g0949 104 PRINTS 70kDa heat shock protein signature 68 87 - -
Vvi7g0949 104 PRINTS 70kDa heat shock protein signature 19 35 - -
Vvi7g0949 104 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 52 95 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0949 Vvi-Chr7 12876279 12879396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0949 9 90 Calmodulin-binding Proteins AT1G56410 54.878 1.31e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0949 K03283 - cit:102617514 72.4034