Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0946 ATGTACTCATCCTTTGGTGGTTTCTCCTCTTACTTGCGAATGGGTCAGGGGTTGGGTTTTTTCTTCTTTATCTTGTCATGTGTCTGTTTGGGAGGGCCTTGCTTTTGTAGTGCACACACAGACAGCATCAAACCTGGGGAAGGGCTTCAATTCTCGAAGCTACTGGTTTCGGCACAAGGGACTTTCACACTGGGGTTCTTTATCTTGGACACCCGCAGTTATTTAGGAATCTGGTACACAAGTGATGTTAACAACAAGAAAGTTTGGGTTGCTAACAGAGACAACCCTATATCTGGCACCAATGCAAATCTCATGCTGGATGGCAATGGAACATTGATGATCATTCACAGTGGGGGTGATCCAATTGTCTTGAATTCCAATCAAGCATCCAGAAACTCCATAGCTACCTTGCTTGATTCTGGAAATTTTGTTGTGTCAGCGTTAAATTCAGATGGATCTGTGAAGCAGACACTATGGGAAAGTTTCGATGATCCTACAGACACGCTCCTGCCTGGGATGAAACTAGGCATCAACTTGAAAACCGGGCAAAACTGGTCACTTGCTTCGTGGATAAACGAACAAGTGCCTGATCCTGGGACTTTCACTCTAGAATGGAATGGCACACAATTGGTAATAAAACGCCGAGGGGACATCTACTGGAGCAGTGGAATTCTGAAAGATCGGAGTTTTGAGTTCATTCAAACTCACCATAACATCTACTATTTCATCAGTGTTTGTAATGACAACGAGATCTACTTCAGCTATTCAGTTCAAGACGGAGCTATTTCAAAGTGGGTATTGAACTGGAGAGGGGGATTTTTTGACACTTACGGAACTCTATTCGTGAAGGAAGATATGTGTGATCCTTATGACAAATATCCAGGGTGTGCAGTGCAAGAGCCACCCACTTGCAGGACTACAGACTTCCAATTCATGAAGCAATCGGTTCTCAATTCAGGATATCCATCATTAATGAACATAGATACGAGCTTGGGCCTTAGTGATTGTCAGGCTATATGCAGGAACAATTGTTCTTGTACTGCTTGTAATACTGTATTCACCAATGAAACTGGATGTCAGTTTTGGAGGGATAAATTGCCACGAGCCCGAGTGGGGGATGCAAATCAGGAGGAGCTCTATGTTTTGTCCTCATCAAAAGACATAGGGAAGCCTTGGTGGATATGGATTATCATTCTCGTTGTAGTAGTATTTCTGTTCATGTTAGCTGTCTTTTGTTGTTCACAGAGAAACTCCAGAGGGGATGGAAAAAAGAGGGAAACTGCAAAAGATATTGACAATGTCAAAGAGTTCAGTTTAGTTTCTGTTATGGCTGCCACGAATAACTTTTCAGATGAAAATAAAATTGGAAAGGGTGGTTTTGGTTCTGTCTATAAGGGGATACTACCCGGGGGCCAAGAAATAGCAGTAAAGAGACTTTCAGGGGTTTCCACATGGGGATTGGATCAGTTCGTAAACGAAAGACTGATTGTCAATCAACAACACAGAAATCTTATCAGACTTTTGGGTTACTGCAGCGAGGGAGAAGAAAGGATGTTAATCTATGAGCTGCTGCCCAACGGAAACTTGGAAGACTTGATCTTTGATCCTGATAGGAGAAAGGGGTTGGACTGGAATACATGGTGCAATATAATTAAGGGGATTGCGCAAGGACTTGATTACTTGCACAACCATTCAAGATTAAACATGGTTCATGGAGATCTAAAAGCAAGTAACATCCTACTCGATCATGACATGAACCCCAAAATTTCTGATTTTGGCACTGCCAGAATTTTTGAGCGAAATGAATCAGAGCCACAAACCAGTAAACTTGTTGGAACATTTGGTTACATGCCACCTGAGTATTTCAGTGAGGGATGGTGTTCACCGAAAACAGATGTTTATAGCTTTGGGGTCCTGATGTTGGAGATTGTGAGCGGCCAGAGGATTATTCCCCCTGATTGTAAGGATGACAACTTAAGTCTTATACGAAATGCTTGGAAGTTATGGGGAGAAGGCAATAGCTTGAAGCTAGTGGATCCAGCGATGGTGGGTCCCCACTCAACAACCCAAATAGTGAGATGGATTCGTGTTGCTCTCTTGTGTATACAGAAGCATGAAGAGAGGCCTACAATGTCAGATGTTTGCTCCATGCTTAACAGAAGGGACCCACCCGAGCCAAATCCACCCGCAATTTTTGCGCTCAGATGA 2208 0.4312 MYSSFGGFSSYLRMGQGLGFFFFILSCVCLGGPCFCSAHTDSIKPGEGLQFSKLLVSAQGTFTLGFFILDTRSYLGIWYTSDVNNKKVWVANRDNPISGTNANLMLDGNGTLMIIHSGGDPIVLNSNQASRNSIATLLDSGNFVVSALNSDGSVKQTLWESFDDPTDTLLPGMKLGINLKTGQNWSLASWINEQVPDPGTFTLEWNGTQLVIKRRGDIYWSSGILKDRSFEFIQTHHNIYYFISVCNDNEIYFSYSVQDGAISKWVLNWRGGFFDTYGTLFVKEDMCDPYDKYPGCAVQEPPTCRTTDFQFMKQSVLNSGYPSLMNIDTSLGLSDCQAICRNNCSCTACNTVFTNETGCQFWRDKLPRARVGDANQEELYVLSSSKDIGKPWWIWIIILVVVVFLFMLAVFCCSQRNSRGDGKKRETAKDIDNVKEFSLVSVMAATNNFSDENKIGKGGFGSVYKGILPGGQEIAVKRLSGVSTWGLDQFVNERLIVNQQHRNLIRLLGYCSEGEERMLIYELLPNGNLEDLIFDPDRRKGLDWNTWCNIIKGIAQGLDYLHNHSRLNMVHGDLKASNILLDHDMNPKISDFGTARIFERNESEPQTSKLVGTFGYMPPEYFSEGWCSPKTDVYSFGVLMLEIVSGQRIIPPDCKDDNLSLIRNAWKLWGEGNSLKLVDPAMVGPHSTTQIVRWIRVALLCIQKHEERPTMSDVCSMLNRRDPPEPNPPAIFALR* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0946 735 Gene3D - 34 162 IPR036426 -
Vvi7g0946 735 SMART blect_4 46 165 IPR001480 -
Vvi7g0946 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Vvi7g0946 735 Pfam Protein kinase domain 450 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0946 735 ProSiteProfiles Bulb-type lectin domain profile. 40 158 IPR001480 -
Vvi7g0946 735 ProSiteProfiles Protein kinase domain profile. 449 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0946 735 FunFam Receptor-like serine/threonine-protein kinase SD1-8 35 162 - -
Vvi7g0946 735 Pfam D-mannose binding lectin 88 190 IPR001480 -
Vvi7g0946 735 Gene3D Transferase(Phosphotransferase) domain 1 524 725 - -
Vvi7g0946 735 Gene3D Phosphorylase Kinase; domain 1 412 523 - -
Vvi7g0946 735 Pfam PAN-like domain 324 366 IPR003609 -
Vvi7g0946 735 ProSitePatterns Protein kinases ATP-binding region signature. 455 477 IPR017441 GO:0005524
Vvi7g0946 735 PIRSF SRK 278 735 IPR024171 GO:0004674
Vvi7g0946 735 PIRSF SRK 14 279 IPR024171 GO:0004674
Vvi7g0946 735 FunFam Putative LRR receptor-like serine/threonine-protein kinase 421 523 - -
Vvi7g0946 735 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 524 726 - -
Vvi7g0946 735 ProSiteProfiles PAN/Apple domain profile. 304 384 IPR003609 -
Vvi7g0946 735 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 191 IPR036426 -
Vvi7g0946 735 SMART serkin_6 449 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0946 735 SUPERFAMILY Protein kinase-like (PK-like) 432 718 IPR011009 -
Vvi7g0946 735 CDD STKc_IRAK 455 720 - -
Vvi7g0946 735 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 332 731 - -
Vvi7g0946 735 CDD B_lectin 55 165 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0946 Vvi-Chr7 12738284 12741157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0946 382 728 Receptor kinase-like Gene Family AT4G05200 45.098 7.85e-93 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi7g0946 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0946 - - vvi:100250063 1506.12