Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0944 ATGAAACGCCGAGGGGGCACCTACTGGAGCAGTGGAACCTTGAAAAATAGGAGCTTTGAGTTCATTCCTTGGTTGAGCTTTGACACTTGCAATAACATCTACAGTTTTAACAGTGTTGCTAATGAAAACGAGATTTACTTTAGCTATTCGGTTCCAGATGGAGTTGTTTCAGAGTGGGCATTGAACTCGAGAGGAGGACTTTCTGACACTAACAGACCTTTATTTGTGACGGACGATGTGTGTGATGGGTTTGAGGAATATCCAGGGTGTGCAGTGCAAAACCCACCCACTTGCAGGACTAGAAAAGACGGATTCATGAAGCAATCGGTTCATATATCAGAATCACCGTCATCAATAAAAGAAGATTCGAGCTTGGGACCTAGTGATTGTCAGGCCATATGCTGGAATAATTGTTCTTGTACTGCTTGTAATACTATATACACTAACGGAACTGGATGTCGGTTTTGGAGTACAAAATTTACACAAACCTACGCGGGTGATGCAAATCGGGAGGCGCTCTATGTTTTATCCTCATCACGAGTTACGGGGAACAGTTGGTGGATATGGGTCATTATTGCAGGAGTGGTACTTGTGGTCCTGTTACTTATGGGCTTCTTATACTATTTAAGGAGAAAATCCAAAGGGGAGAGAAAAATGGAGGAAGCTATGCTGCATGAATTGGCAACTTCAAATAGCTTTAGTGATTCAAAAGATGTTGACCATGATGGAAAGAGGGCTCATGATCTCAAACTGTTCAGTTTTGATTCTATTGTGGTTGCCTCGAATAACTTTTCATCTGAAAATAAACTTGGAGAGGGCGGATTTGGCCCAGTTTATAAGGGGAAATTACCTGAGGGGCAAGAAATAGCAGTGAAGAGACTTTCAAGGGGCTCCGGACAAGGTTTGGTGGAATTCAAGAATGAGATTAGACTGATTGCCAGACTCCAACACATGAATCTTGTTAGACTTTTGGGTTGTTGCAGCAAGGGAGAAGAAAAGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTGGACTTCTTCCTCTTTGATCCTGCTAGAAGAAAGATATTAGATTGGAAAAGATGTCACAATATCATTGAGGGGATTGCACAAGGACTTCTTTACTTGCATAAATATTCAAGACTAAGAATTATTCATAGAGATCTAAAAGCAAGTAACATCCTACTTGATCATGACTTGAACCCCAAAATTTCTGATTTTGGCATGGCCAGAACTTTTGGGCGAAATGCATCAGAAGCAAATACAAATAGGATTGTTGGAACATATGGCTACATGCCCCCTGAGTATGCCATGGAAGGAATTTTCTCAGTGAAATCAGATGTTTATAGCTTTGGGGTGCTACTGTTGGAGATTGTGAGCGGCCGGAAGAACAAGAGCTTTTATCATAATGACGGTGCCCTTACCATAAACCTGGCAGGATACGCTTGGGAGCTATGGAAAGAAGGTACTAGCTTGCAGCTAGTGGATCCAATGCTGGAGGATTTCCACTCATCAACCCAAATGTTGAGATGCATTCATATTGCTCTCTTGTGTGTACAGGAGAGCGCAGCAGATAGGCCTACAATGTCAACTGTTATCTCCATGCTCACCAACGAAACTGTGCCCCTACCAAACCCAAATCTGCCCGCATTTTCCATTCATCATACAGTGTTAGAGCTAGATTCACACAAAGGCGGGCCACAGAGCTGTTCTGGAAGTGTAAACATTTCAGAGATGGAAGGTCGGTAA 1752 0.4247 MKRRGGTYWSSGTLKNRSFEFIPWLSFDTCNNIYSFNSVANENEIYFSYSVPDGVVSEWALNSRGGLSDTNRPLFVTDDVCDGFEEYPGCAVQNPPTCRTRKDGFMKQSVHISESPSSIKEDSSLGPSDCQAICWNNCSCTACNTIYTNGTGCRFWSTKFTQTYAGDANREALYVLSSSRVTGNSWWIWVIIAGVVLVVLLLMGFLYYLRRKSKGERKMEEAMLHELATSNSFSDSKDVDHDGKRAHDLKLFSFDSIVVASNNFSSENKLGEGGFGPVYKGKLPEGQEIAVKRLSRGSGQGLVEFKNEIRLIARLQHMNLVRLLGCCSKGEEKMLIYEFMPNKSLDFFLFDPARRKILDWKRCHNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDHDLNPKISDFGMARTFGRNASEANTNRIVGTYGYMPPEYAMEGIFSVKSDVYSFGVLLLEIVSGRKNKSFYHNDGALTINLAGYAWELWKEGTSLQLVDPMLEDFHSSTQMLRCIHIALLCVQESAADRPTMSTVISMLTNETVPLPNPNLPAFSIHHTVLELDSHKGGPQSCSGSVNISEMEGR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0944 583 CDD STKc_IRAK 270 539 - -
Vvi7g0944 583 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 545 - -
Vvi7g0944 583 Gene3D Transferase(Phosphotransferase) domain 1 340 543 - -
Vvi7g0944 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Vvi7g0944 583 SUPERFAMILY Protein kinase-like (PK-like) 248 557 IPR011009 -
Vvi7g0944 583 ProSiteProfiles Protein kinase domain profile. 264 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0944 583 SMART serkin_6 264 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0944 583 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 126 574 - -
Vvi7g0944 583 MobiDBLite consensus disorder prediction 564 583 - -
Vvi7g0944 583 Pfam Protein tyrosine and serine/threonine kinase 267 537 IPR001245 GO:0004672|GO:0006468
Vvi7g0944 583 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 229 339 - -
Vvi7g0944 583 Pfam PAN-like domain 98 161 IPR003609 -
Vvi7g0944 583 Gene3D Phosphorylase Kinase; domain 1 237 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0944 Vvi-Chr7 12718396 12720851 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0944 176 555 Receptor kinase-like Gene Family AT4G23230 52.208 1.22e-133 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi7g0944 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0944 - - vvi:100248546 1156.74