Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0923 ATGTGGTTTCCTCATCTATTGCCTTACAAGAACCATACTTCTTCAAGACCGACAATGGATTTAGGGAAGAAAGAAGAAGAGGCTATGTTACATGAATTGACAACTTTTGACAGATCTATTGATTTAGATGAGAATGGAAATAATGGGAATCATGGTCATAAGTTGAAAGTTTTTAATTTTGATTACATCATGATTGCCACAAATAATTTTTCATCTCAAAATAAAATTGGAAAAGGTGGTTTTGGTGATGTATACAAGGGGAAACTAATTGATGGGCAAGAAATAGCAGTAAAGAGACTTTCAAGAGGATCTGGACAAGGGCTGGTGGAGTTCAAAAATGAGATTAGGCTAATTAGCAATCTACAACATATGAATATTATTAGGCTTATAGGCTGCAGCATCAGTGGAGAAGAAAGGATATTAATCTATGAGTTCATGCCAAACAAAAGCTTGGATTTCTTCCTTTTTGATGCTAGGTGCAAGAAATTATTGGATTGGAAGAAGCGTTACAACATTATTGAGGGAATTGCTCAAGGACTTCTTTACTTGCATAAATACTCGAGATTGAGAATTATACATAGAGATCTTAAAGCAAGTAATATCTTACTTGATCATGATATGAACCCCAAGATTTCTGATTTTGGCATGGCTAGAATTGTTAGGCCAAATGCAATTGAAGCAAATACAGAAAGGATTGTTGGGACAATTGGTTACATGTCACCCGAATATGCCAGGAATGGTATTTTCTCAATGAAATCAGATGTATATAGTTTTGGAGTTTTAATGTTGGAGATCATAAGTGGCCGCAAGAATAAAATCTTTCATCACAATGATTGCACCATCAACCTAGTAGGATATGAAACAATTATATGGGAAGCTTCCGAAAATTTGATCTGA 897 0.3478 MWFPHLLPYKNHTSSRPTMDLGKKEEEAMLHELTTFDRSIDLDENGNNGNHGHKLKVFNFDYIMIATNNFSSQNKIGKGGFGDVYKGKLIDGQEIAVKRLSRGSGQGLVEFKNEIRLISNLQHMNIIRLIGCSISGEERILIYEFMPNKSLDFFLFDARCKKLLDWKKRYNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDHDMNPKISDFGMARIVRPNAIEANTERIVGTIGYMSPEYARNGIFSMKSDVYSFGVLMLEIISGRKNKIFHHNDCTINLVGYETIIWEASENLI* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0923 298 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Vvi7g0923 298 FunFam Uncharacterized protein 44 145 - -
Vvi7g0923 298 Pfam Protein tyrosine and serine/threonine kinase 72 270 IPR001245 GO:0004672|GO:0006468
Vvi7g0923 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Vvi7g0923 298 FunFam Os11g0601500 protein 146 293 - -
Vvi7g0923 298 ProSiteProfiles Protein kinase domain profile. 70 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0923 298 SMART serkin_6 70 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0923 298 SUPERFAMILY Protein kinase-like (PK-like) 55 271 IPR011009 -
Vvi7g0923 298 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 292 - -
Vvi7g0923 298 Gene3D Phosphorylase Kinase; domain 1 44 145 - -
Vvi7g0923 298 Gene3D Transferase(Phosphotransferase) domain 1 146 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0923 Vvi-Chr7 12283370 12285793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0923 41 291 Receptor kinase-like Gene Family AT4G05200 60.159 7.07e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi7g0923 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0923 - - vvi:100853375 525.783