Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0917 ATGGCCACACCGTCACCACCACCACCATCATCCTCACCTCCAAACCGGCCCAAGAAAGCTCAACCCCTCCCATGGTCCCACCAAGAAACCACGCACCTCATCCAAGCTTACCAAGAAAAATGGTACTCCCTCAAGCGCGGCCAGCTCAAAGCTTCCCAATGGGAGGAAGTCGCCGTCACCGTCGCCGCCCGATGCAACTACGACGAGCCCTCCAAATCCGCCACCCAGTGCCGCCACAAAATCGAAAAGCTCCGTAAACGCTACCGCGCCGAAAAACAGCGCATCGTCATCGGCGCCGCCGCCTCCTCCTCCTGGCCATACTTCCATCTCATGGACTCCCTCGAACGTGGCCCCCTCCCCATCTCCGCTCAACCCATGTCCGTTCTCAAATACGAAAAAGCATACCCCTACTCTCACAACTGCAAACCCAATGACGATAATGTCGGCAACGACGATTACAGCAATTCTAGCAACGACGAAGATTCTGGGGCTCTCAAAACCAGGTCGCGCAGCATCAATTATATTCTGCAGAGGCCCGCTGTTGTCAACCGGTTTGCAGTAGACCCGAAATTGAACTGGAGTACAGAGCAGGAGGAGACGGGGGCGGTGGTGGTGGAGGGAGGGAAGGGCGTGGTTTGGGAGTTGGCGGGGGAGATGAGGGCTTTTGCGGAGAGGTTTGTGCGGATGGAGAATATGAAGATGGAGATGATGAAGGAAACAGAGAGGCGTAGAATGGAGATGGAGAGCAGGCGAATGGAGATGATTGTGGAGTCGCAGCGGAAGATTGTGGAGACAATTGGGAGGGCCCTGGGGTCTAATAAGAAGTTGAAGATGAGTCAAGAGATATGA 849 0.5512 MATPSPPPPSSSPPNRPKKAQPLPWSHQETTHLIQAYQEKWYSLKRGQLKASQWEEVAVTVAARCNYDEPSKSATQCRHKIEKLRKRYRAEKQRIVIGAAASSSWPYFHLMDSLERGPLPISAQPMSVLKYEKAYPYSHNCKPNDDNVGNDDYSNSSNDEDSGALKTRSRSINYILQRPAVVNRFAVDPKLNWSTEQEETGAVVVEGGKGVVWELAGEMRAFAERFVRMENMKMEMMKETERRRMEMESRRMEMIVESQRKIVETIGRALGSNKKLKMSQEI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0917 282 MobiDBLite consensus disorder prediction 143 165 - -
Vvi7g0917 282 MobiDBLite consensus disorder prediction 1 26 - -
Vvi7g0917 282 FunFam Trihelix transcription factor ASIL2 25 90 - -
Vvi7g0917 282 MobiDBLite consensus disorder prediction 1 20 - -
Vvi7g0917 282 MobiDBLite consensus disorder prediction 140 165 - -
Vvi7g0917 282 Coils Coil 74 94 - -
Vvi7g0917 282 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 269 IPR044823 -
Vvi7g0917 282 Gene3D - 25 90 - -
Vvi7g0917 282 SMART 118neu2 32 119 IPR006578 -
Vvi7g0917 282 Coils Coil 237 257 - -
Vvi7g0917 282 ProSiteProfiles Myb-like domain profile. 24 85 IPR001005 -
Vvi7g0917 282 Pfam Myb/SANT-like DNA-binding domain 24 114 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0917 Vvi-Chr7 12046991 12047839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0917 25 114 Trihelix Transcription Factor Family AT3G14180 38.889 3.36e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vvi7g0917 Myb_DNA-bind_4 6.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0917 - - vvi:100250032 468.003