Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0915 ATGTTTGAGGTTAAAACAACAAATGGAGACACCTTTTTAGGAGGGGAGGACTTTGACGATGATCTATTAGAGTTCTTGGTGAGCGAGTTCAAGAGAACTAAAGGAATTGATCTGACAAAGGACAGACTTGCTTTGCGGAGGCTTCGAGAAGCAGCTGAAAAGGCAAACATAGAACTCTCATCTACATCCCATACTGATATCAAACTACCATTCATAACTACTAATGCTTCTGGTGCAAAACATTTAAATATCACCCTGACCATAACAAATTTTGAGGCTTTGGTGGACAATTTGATTGAGAGAACAAGAAATCCATGCAAAGAGTTGTTTGAAGGATGCAGGAATATCAGTCAAGGAGGTTGA 363 0.3939 MFEVKTTNGDTFLGGEDFDDDLLEFLVSEFKRTKGIDLTKDRLALRRLREAAEKANIELSSTSHTDIKLPFITTNASGAKHLNITLTITNFEALVDNLIERTRNPCKELFEGCRNISQGG* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0915 120 Gene3D Actin; Chain A, domain 4 15 102 - -
Vvi7g0915 120 SUPERFAMILY Actin-like ATPase domain 2 113 IPR043129 -
Vvi7g0915 120 FunFam Molecular chaperone DnaK 15 102 - -
Vvi7g0915 120 PANTHER HEAT SHOCK PROTEIN 70KDA 2 109 IPR013126 GO:0005524|GO:0140662
Vvi7g0915 120 Coils Coil 45 65 - -
Vvi7g0915 120 Pfam Hsp70 protein 2 111 IPR013126 GO:0005524|GO:0140662
Vvi7g0915 120 Gene3D - 2 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0915 Vvi-Chr7 12032100 12032541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0915 1 113 Calmodulin-binding Proteins AT5G02490 40.708 5.91e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0915 K04043 - vvi:100248447 148.288