Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0896 ATGGCAATTGGTGATAGGATTCTCACTCCTGCAATATCAGTTCTTTCAACAGCTTCAAGTGTTCAACTGAAAATTACAGAGCTCCATGAGAATCATATTGTTCTAGTCTCGGGTGTCGTGTTAGTGGTGCTTTTCTCTCTTCAACGCTATGGAACACATAGAGTTGCCTTCATGTTTGCTCCAATTGTCACAGCATGGCTTCTGTGTATTAGCGGCATTGGGATATATAGCATCTTGAGGTGGAATCCGCATGTATTTTGTGCCCTTTATCCAACTTACATGTTAAAGTTCCTTAAAAGCACAGGCATTGAAGGATGGATATCATTAGGAGGAGTGGTTCTCTCAATCACAGAGCAGACTTTCAATGATCCTAGTCATGAAGAAAACTCAGTGCAGTCTTCACATGATATCCAAGTTATGAAATCTGGCGATGAGCAGTTGGAAAACTCTCTTCCCAAAGAAGAGTCTTTGCCGATATTGAAAGCTAGGGAATCTGGGCTTGCACACATTCTTGGGCATTCTCATGCAAAAGAATCACTTGCTAGCCTAACTGTAGCAAGGACGCACCAAAGAAGATGA 579 0.4197 MAIGDRILTPAISVLSTASSVQLKITELHENHIVLVSGVVLVVLFSLQRYGTHRVAFMFAPIVTAWLLCISGIGIYSILRWNPHVFCALYPTYMLKFLKSTGIEGWISLGGVVLSITEQTFNDPSHEENSVQSSHDIQVMKSGDEQLENSLPKEESLPILKARESGLAHILGHSHAKESLASLTVARTHQRR* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0896 192 Pfam K+ potassium transporter 1 117 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi7g0896 192 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 134 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0896 Vvi-Chr7 11564089 11564761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0896 1 126 Inorganic Solute Cotransporters AT2G30070 64.062 8.94e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0896 K03549 - vvi:100262109 211.846