Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0889 ATGGGGAAGTACATGAAGAAAGCTAAAATCACAGGCGACGTGACAGTCATGGAGGTGTCATCTTCTCTGGGCGTTCGAACCAGAGCCAAAACCCTAGCTTTGCAGAGGCTCCAGAAAACGACTCACCAGGAAGGGCCGAAGCCAGACACCTCTTATCTCGAGCTCCGAAGCCGTAGGCTAGAGAAGCCTCCACTGCTCAGCGAACCCAACAAGAAGCAAAACCCTAACCCTAAGGCGAGCTCAAGGGTGGAGCTGGGTTCAGTGAACTCAAACTCTGTTGGGTCTGTGCCACCCGGTGAGAAAATTAATGCCGTGGAAACTGAGGATGTGGGTGTTGAGGCTTCGTATGGCGAGAATGTTTTGGAGTTTGAGGGCAGAGACAGAAGCACAAGGGAAAGTACACCCTGCAGTTTGATTAGGGACCCAGACACCATTGCAACCCCTGGTTCTACAACAAGGCCGTCTAGCTCAAGTGTAACCACCCGAAGAGTTCGGAGTAATGTGCTGGGGGACATCCCAACAGCTGCTGAGTTAGAGGAGTTTTTTACTCATGCAGAGGAACATGCCCAGAAAGAGTTCATGGACAAGTACAACTTTGACATAGTGAATGATACACCTCTCCCTGGACGCTTTGAATGGGTTCAAGTAAGCCCATGA 657 0.5068 MGKYMKKAKITGDVTVMEVSSSLGVRTRAKTLALQRLQKTTHQEGPKPDTSYLELRSRRLEKPPLLSEPNKKQNPNPKASSRVELGSVNSNSVGSVPPGEKINAVETEDVGVEASYGENVLEFEGRDRSTRESTPCSLIRDPDTIATPGSTTRPSSSSVTTRRVRSNVLGDIPTAAELEEFFTHAEEHAQKEFMDKYNFDIVNDTPLPGRFEWVQVSP* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0889 218 MobiDBLite consensus disorder prediction 120 134 - -
Vvi7g0889 218 MobiDBLite consensus disorder prediction 144 163 - -
Vvi7g0889 218 PIRSF CKI_KRP_plant 1 218 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vvi7g0889 218 Gene3D p27 160 218 IPR044898 -
Vvi7g0889 218 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 218 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vvi7g0889 218 MobiDBLite consensus disorder prediction 36 163 - -
Vvi7g0889 218 Pfam Cyclin-dependent kinase inhibitor 172 216 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vvi7g0889 218 MobiDBLite consensus disorder prediction 69 97 - -
Vvi7g0889 218 MobiDBLite consensus disorder prediction 49 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0889 Vvi-Chr7 11461788 11464831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0889 1 218 Core Cell Cycle Gene Families AT5G48820 48.980 9.60e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0889 - - vvi:100854136 397.127