Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0881 ATGGCGGAGATTGCCGTCAACATCGTCATCGACAAGTTGCTCCCATTACTAGATCAAGAAGCCAGACTATTGGGAGGCGTCCACACACAAGTTGAAGACATTAAAACAGAGCTACTATATATTCAAGCTTTCCTAATGGATGCAGATGCAAAGGGGGAGAAAGCAGATGTCAGCCAAGGCCTTAAAACTTGGATTCAAGACTTAAGGGAGACTGCTTATTCCATAGAAGATGTCATCGATGAATACTTGCTTCACTTGGGAAATCCAAGTCAACGGCATAGATTCATTGGTTTCCTCTGCAAAGTTGGTCGCTTGATAAAAAAATTGAAACGACGCCATGAGGTAGCCTCCAAGATCCGTGATATCCAGAAAAAGGTTGTCAAACTCAAGGAAACAAGTTCAACTTACGGCTTCATTAGTTCAGTTCAGCCAGGATCTGGAGGCAGAAGTACAAGTGCGCCATGGCATGACCCTCGGGTGACTTCCCTTTTCATAGATGATGCTGAAATTGTTGGTATTGAATCTCAAAATAGAAAACTCACAAGCCGGCTGGTGGAGGGAACTCCAAAACGGACTGTAATTTCAGTGGTTGGCATGGGCGGACTTGGCAAGACCACTCTTGCCAAGAAAGTATATGACAACAAGGAATTAGTGGGATACTTTGATTGCTCTGCTTGGATCACTGTGTCTCAGTCATTCAAGATGGAAGAGCTACTGCGGAACATGTCAAAGAAATTCTATCAATCAAGGAAGGAGGCAGTCCCTGAGGGTCTTGATACAACAGACGAGATGTCACTGATTACTCTAACCAGGGGATATTTACAAGATAAAAGGTATGTGGTTGTTTTTGATGATGTATGGAAACTAGATTTCTGGGGAATTATAAAATGTGTTTTACCAGAAAATGGAAAAGGGAGCAGGATAATAATCACAACCCGTAATGATGAGGTAGCTTCCTCTTGTATAGAATCTTCATTTGATTACATCCACAAACTGCAACCCCTGTCTCCAAAGAGTTCCTGGGAACTCTTTTGCAAGAAGACATTCCAGGGTGGATGTCCTCCAGATTTGGAGAAATTGTCTCTTGATATTGTCAAAAGATGTGGAGGATTGCCACTAGCGATTGTAGCAGTCGGTGGTCTTTTGTCAAGAAAAGAGAAGCTTATCCCCGAATGGAAAAAATTTAGTGACAACCTACGCTCTGAGTTTCAAAGTAATTCACATCTTGAAAGTATCAATACAATTCTCTCTCTCAGCTACCATGATCTGCCTTACTACCTCAAGTCCTGTTTCTTGTACTTGGCCATTTTCCCGGAGGACTACACAATTAGATGTGGACCACTTACTCGGCTGTGGATTGCTGAGGGTTTTGTGAAAGCCAAGAAAGATGTAATGCTAGAAGATGTTGCAGAAGAATTCTTGACTGAGCTCATACACAGAAACTTAGTTCAAGTGTCTGACGTATATGCTGATGGAAAAATTGAAAGTTGTCACATTCATGACTTGATACGTGAGATTATTCTCAAAAAGGCCGCAGAGTTGAGTTTTTGTTGTTTGATGACTGGAGAAGCCTCAAGTTTTGATGGAGGATTTAGGCATCTATCAGTTCATAATAGCTCATATAATGTTGTAAACATTATTGGTAAAAAGTCGCACATCCGCTCCATTTTTCTTTACAACTCTCAGATGTTTTTTCTGGAGAAATTGGCTTCAAGATTTAATCTTCTGAAAGTATTGGATCTTAATGATTCTGGTTTGGATAGTTTTCCTGAAAATTTGGGAAATCTATTGCATTTGAGGTACTTAAGTCTGAGGAATACAAAAGTCAGGATGCTTCCAAGGTCCATAGGTAAACTACAAAACCTACAGACTTTGGATCTGAAATATTCCCTTGTGGAGGATCTTCCTGTTGAGATCAATAGGCTTAAAAAGCTGCGCAATATTCTAGCCCAGAATTATGATTTCGATGGTGATTTGGGCATGTTTTCTGTTAAAGGAGTGCAAGTAAAGGAGGGTATTGGGTGTTTGGAAGAGTTGCAGAAGCTGTCCTGTGTGGAGGCAAACCATGGGGTGGGGGTAATTAAAGAGCTGGGAAAGCTGAGGCAGTTGAGGAAGCTGAGTATTACAAAACTTACTAGAGAAAATGGGAAGCATTTATTTGCTTCCATTACAAACATGAATCGCCTTGAATCTTTGTCGATTTCGTCATTGAGTGAAGAGGAGATTCTGGATTTACAGCATGTATCGTATCCACCCTCCTGTCTTACACGTCTCAAATTGATCGGGCCTTTGGAGAAGTTACCTGACTGGATTTCTGAACTTCAAAATTTATCTATTGTAATCTTGTATGGTTCTAACTTGATGAATGATCCAGTGAAAGTCCTTCAAGCCCTGCCTAACCTGCAGATGCTTCAACTAATGCGTGCCTCTGCTGTTGAGGAATTGTGTTTTGAGGCCACCGGGTTTCAGAAACTTAAGCGCTTAGTTGTCCTTTACTTGGTGGGAGTGAAGAGGGTGAAAATAGAGAACGGAGCACTGCCCCTACTCGAGACGCTTCTAGTTGGGCCCTGCCCACAACTGGAGGAGCTCCCCCCGGGTATCCGCCACCTTACCAGACTTACAACTCTTGAATTTTATAATTTGCAGGAAGAACTGAAACTAAGTATGATACCCTCCCGGGGCAGAAATTATAAGATAGTTGAGCACATTCCAAACGTCTTTTTTTATGGGAATGGAACTCAAAGCCTACGAGAGCTATCTGACTACAAATCTTAA 2775 0.4169 MAEIAVNIVIDKLLPLLDQEARLLGGVHTQVEDIKTELLYIQAFLMDADAKGEKADVSQGLKTWIQDLRETAYSIEDVIDEYLLHLGNPSQRHRFIGFLCKVGRLIKKLKRRHEVASKIRDIQKKVVKLKETSSTYGFISSVQPGSGGRSTSAPWHDPRVTSLFIDDAEIVGIESQNRKLTSRLVEGTPKRTVISVVGMGGLGKTTLAKKVYDNKELVGYFDCSAWITVSQSFKMEELLRNMSKKFYQSRKEAVPEGLDTTDEMSLITLTRGYLQDKRYVVVFDDVWKLDFWGIIKCVLPENGKGSRIIITTRNDEVASSCIESSFDYIHKLQPLSPKSSWELFCKKTFQGGCPPDLEKLSLDIVKRCGGLPLAIVAVGGLLSRKEKLIPEWKKFSDNLRSEFQSNSHLESINTILSLSYHDLPYYLKSCFLYLAIFPEDYTIRCGPLTRLWIAEGFVKAKKDVMLEDVAEEFLTELIHRNLVQVSDVYADGKIESCHIHDLIREIILKKAAELSFCCLMTGEASSFDGGFRHLSVHNSSYNVVNIIGKKSHIRSIFLYNSQMFFLEKLASRFNLLKVLDLNDSGLDSFPENLGNLLHLRYLSLRNTKVRMLPRSIGKLQNLQTLDLKYSLVEDLPVEINRLKKLRNILAQNYDFDGDLGMFSVKGVQVKEGIGCLEELQKLSCVEANHGVGVIKELGKLRQLRKLSITKLTRENGKHLFASITNMNRLESLSISSLSEEEILDLQHVSYPPSCLTRLKLIGPLEKLPDWISELQNLSIVILYGSNLMNDPVKVLQALPNLQMLQLMRASAVEELCFEATGFQKLKRLVVLYLVGVKRVKIENGALPLLETLLVGPCPQLEELPPGIRHLTRLTTLEFYNLQEELKLSMIPSRGRNYKIVEHIPNVFFYGNGTQSLRELSDYKS* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0881 924 Gene3D Ribonuclease Inhibitor 535 918 IPR032675 -
Vvi7g0881 924 Pfam Rx N-terminal domain 5 95 IPR041118 -
Vvi7g0881 924 Pfam NB-ARC domain 175 421 IPR002182 GO:0043531
Vvi7g0881 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 434 IPR027417 -
Vvi7g0881 924 SUPERFAMILY L domain-like 499 882 - -
Vvi7g0881 924 CDD RX-CC_like 2 131 IPR038005 -
Vvi7g0881 924 Gene3D - 4 116 - -
Vvi7g0881 924 Gene3D - 420 511 IPR036388 -
Vvi7g0881 924 Gene3D - 335 419 IPR042197 -
Vvi7g0881 924 FunFam Probable disease resistance protein At1g61300 157 325 - -
Vvi7g0881 924 PRINTS Disease resistance protein signature 368 382 - -
Vvi7g0881 924 PRINTS Disease resistance protein signature 193 208 - -
Vvi7g0881 924 PRINTS Disease resistance protein signature 617 633 - -
Vvi7g0881 924 PRINTS Disease resistance protein signature 273 287 - -
Vvi7g0881 924 PANTHER DISEASE RESISTANCE PROTEIN RP 31 849 IPR044974 GO:0006952
Vvi7g0881 924 Gene3D - 158 325 IPR027417 -
Vvi7g0881 924 FunFam Probable disease resistance protein At1g63360 420 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0881 Vvi-Chr7 11136840 11139614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0881 194 836 WRKY Transcription Factor Family AT5G45050 23.719 6.97e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0881 K13457 - vvi:100852949 1814.28