Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0880 ATGGCAGAGATTGCCGTCACCACAGTCATCGACAAGTTGGTGTCTTTGGTAGATGAAGAAGCCAGATTGTTGGGAGGTGTCCACACTCAAGTTGAAGACATCAAAACTGAGCTGCTGTATATTCAAGCTTTCCTTAAGGATGCAGATGCAAAGGCCGATAAGGGAGACATCAGCCATGGCCTTAAAACTTGGATCCAAGACTTGAGGAAGACTGCATACTCCATGGAAGATCTCATTGATGAATACTTGCTTCACTTTGCAAATCCAAATCACCGGCATCGATTCTTTGGTTTCCTCTGCAAAGTTGCTCGCTCCATACAAAAACTGAAACCACGCCATGAGATCGCCTCCAAGATCCGGGATATCAAGAAAAAGGTTGGTAAACTGAAGGAAACAAGTTCGAGTTACGTCTTCATTAGTTCTATTGAGCCAAGATCAAGCAGCAGTTCTGCAAGTGCTCCATGGCATGACCAGCGGGTGACTTCTCTTTTCATGGACGAAACTGAAATTGTTGGTATTGAACCTCTGAGAAATGAACTGATAAGCCGGCTGGTAGAGGGAAATCCCAAACGAACTGTAATTTCCGTGGTCGGCATGGGTGGACTTGGCAAGACGACTTTCGCCAAAAAAGTTTACGACAACCAGAGAGTGGTGGGACACTTCGATTGCAATGCTTGGGTCACTGTGTCTCAATCATTCAAGATGGAGGAGCTACTACGGAACATGACAAAGAAATTCTATCAGGGAAGAAAGGAAGCAGTTCCTGAGGGCATCGATACAATAGACGAGATGTCACTGATTGCCTTAATCAGGCAGTATTTACAAGATAAAAGGTATGTTGTTGTTTTTGATGATGTATGGAAACTAGATTTCTGGGGATTTATTAAATATGTTTTACCAGAAAATGGGAAGGGCAGTAGGATAATAATCACTACACGTAATGATGAGGTAGCCTCTTCTTGCAAAGAGTCGTCATTTGATTACATCCACAAGCTGCAACCCCTGTCCCCAAAGAGTTCCTGGGAGCTCTTTTGCAAGAAGACATTCCAGGGTGGATGTCCTCCAGAATTGGAGAAACTGTCTCTTGATATTGTCAAAAGATGTGGAGGATTGCCACTAGCGATTGTGGCAATAGGTGGTCTTTTGTCAAGAAAACAGAATGAGTCCGAGTGGAAAAATTTTAGTGACAACCTTGGGTCCGAGTTAGAAAGCAATTCCCGTCTTCAACCTATAAATACAATCCTCTCCCTCAGTTATCATGATCTACCTTACTACCTTAAGTCCTGTTTCTTATACTTGGCCATTTTTCCAGAGGACTACACAATTAAATGTACCAAACTGACTCGGCTGTGGATAGCTGAGGGGTTTGTAAAAGCTAAGAAGGGTGTGACAATGGAAGAGCTTGCAGAGGAATTCTTGACTGAGCTGATCAATAGGAGCTTAGTTCAAGTGTCAGACGTAGATTTGGAAGGAAAAATTAGAAGCTGCCATATCCATGACTTGATGCGTGAGATGATTCTCAAAATGGCTGAGGAAATGAGTTTTTGTCGTGTTTTGGCTGGAGAAGGCTCAAGTTTTGACGGAAAATCTCGTCGAATATCAGTCCATAACAGCACAAATAATATTCTAGACACCATTGATAAAAACTCTCATGTTCGCTCCATTTTTCTCTTCAATTCTGAGATGATTTTCACTAGTACATTGGCTTCAAAATGTAAGCTTGTGAAGGTATTGGATTTTAAAGATGCCCCTCTTGAGAGTGTTCCTGAAGATTTGGGAAATCTATTTCATCTGAAGTTCTTAAGCCTGAGAAAGACCAAAGTCAAGATGCTTCCAAAGTCTATAGGTAAGCTACAAAACCTACAGACTTTGGATCTGAAACATTCCCTCGTAGAGGAGCTTCCTGTTGAGATCAATAGGCTCCAAAAGCTGCGCCACATTCTAGCCTACAACTATAACTTTGATGTTGAATTCAGCTCGGTTTCTGTTAAAGGAGTGCATGTAAAGGAAGGGATTGGGTGCTTGGAAGACTTGCAGAAGCTGTGTTTTGTGGAGGGCAATCAAGGGACAGATGTAATTAAAGAGCTTGGAAAGCTAAGGCAATTGAGAAAGCTGGGGATTACAAAACTTACTAGAGAAAATGGGCAGCCTTTATGTGCCTCCATTATGAAAATGAACCACCTTAAATCTTTGTCAATCTCTTCATCAACCGAAGATGAGATTCTTGATTTGCAGCACGTATCGGATCCTCCACCATGCCTTTCACGTCTTGAGTTGTATGGACGTTTAGACAAGCTACCTGACTGGATTTCTAAACTTAAAAGTCTAGTGAAGTTAGGTTTATGGAAGTCAAGACTAAGCCACGATCCAATGGGAGTCCTTGGAGCCCAGCTGCCTAATCTGCTGGAGCTCGAGCTCCTCCAAACGCATGCGGTCGAGCAATTGTGTTTTGAAGCAATAGGATTTCAGAAACTTAAGGTCCTCCGTATCTGTGATTTGATAGAGCTCAAGAAAGTGAAAATAGAGAATGGGGCATTGCCTCAGGTTGAAGAGCTTGAAATTGGGCCTAGTCCACAGCTGGAAGAGGTGCCCCATGGCATCTACTACCTCAGAAAACTTAAAACTCTTGCATTTCGTGATATGCAGGAAGAATTTGAACTAAGTATGATACCCTACAGAGGAAGAAATTATGATATAGTTGAGCATATCCCAAATGTCTTCTTCTATCAGAGGCTTTCAGGACAACATTACGCGGTTCAGAGTCTACGACAACTAGCTGAAACCATCCCCAGAGTCTATTGCTAG 2805 0.425 MAEIAVTTVIDKLVSLVDEEARLLGGVHTQVEDIKTELLYIQAFLKDADAKADKGDISHGLKTWIQDLRKTAYSMEDLIDEYLLHFANPNHRHRFFGFLCKVARSIQKLKPRHEIASKIRDIKKKVGKLKETSSSYVFISSIEPRSSSSSASAPWHDQRVTSLFMDETEIVGIEPLRNELISRLVEGNPKRTVISVVGMGGLGKTTFAKKVYDNQRVVGHFDCNAWVTVSQSFKMEELLRNMTKKFYQGRKEAVPEGIDTIDEMSLIALIRQYLQDKRYVVVFDDVWKLDFWGFIKYVLPENGKGSRIIITTRNDEVASSCKESSFDYIHKLQPLSPKSSWELFCKKTFQGGCPPELEKLSLDIVKRCGGLPLAIVAIGGLLSRKQNESEWKNFSDNLGSELESNSRLQPINTILSLSYHDLPYYLKSCFLYLAIFPEDYTIKCTKLTRLWIAEGFVKAKKGVTMEELAEEFLTELINRSLVQVSDVDLEGKIRSCHIHDLMREMILKMAEEMSFCRVLAGEGSSFDGKSRRISVHNSTNNILDTIDKNSHVRSIFLFNSEMIFTSTLASKCKLVKVLDFKDAPLESVPEDLGNLFHLKFLSLRKTKVKMLPKSIGKLQNLQTLDLKHSLVEELPVEINRLQKLRHILAYNYNFDVEFSSVSVKGVHVKEGIGCLEDLQKLCFVEGNQGTDVIKELGKLRQLRKLGITKLTRENGQPLCASIMKMNHLKSLSISSSTEDEILDLQHVSDPPPCLSRLELYGRLDKLPDWISKLKSLVKLGLWKSRLSHDPMGVLGAQLPNLLELELLQTHAVEQLCFEAIGFQKLKVLRICDLIELKKVKIENGALPQVEELEIGPSPQLEEVPHGIYYLRKLKTLAFRDMQEEFELSMIPYRGRNYDIVEHIPNVFFYQRLSGQHYAVQSLRQLAETIPRVYC* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0880 934 SUPERFAMILY L domain-like 498 884 - -
Vvi7g0880 934 Gene3D - 335 418 IPR042197 -
Vvi7g0880 934 FunFam Probable disease resistance protein At5g66910 334 418 - -
Vvi7g0880 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 433 IPR027417 -
Vvi7g0880 934 PRINTS Disease resistance protein signature 193 208 - -
Vvi7g0880 934 PRINTS Disease resistance protein signature 616 632 - -
Vvi7g0880 934 PRINTS Disease resistance protein signature 368 382 - -
Vvi7g0880 934 PRINTS Disease resistance protein signature 273 287 - -
Vvi7g0880 934 Pfam Rx N-terminal domain 5 91 IPR041118 -
Vvi7g0880 934 Pfam NB-ARC domain 178 420 IPR002182 GO:0043531
Vvi7g0880 934 Gene3D Ribonuclease Inhibitor 533 906 IPR032675 -
Vvi7g0880 934 FunFam Probable disease resistance protein At1g61300 155 325 - -
Vvi7g0880 934 CDD RX-CC_like 2 131 IPR038005 -
Vvi7g0880 934 Gene3D - 4 116 - -
Vvi7g0880 934 Gene3D - 419 509 IPR036388 -
Vvi7g0880 934 Gene3D - 157 327 IPR027417 -
Vvi7g0880 934 PANTHER DISEASE RESISTANCE PROTEIN RP 31 841 IPR044974 GO:0006952
Vvi7g0880 934 FunFam Probable disease resistance protein At1g63360 419 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0880 Vvi-Chr7 11128916 11131720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0880 194 629 WRKY Transcription Factor Family AT5G45050 23.679 8.04e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0880 K13457 - vvi:100253350 1805.42