Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0877 ATGGCGGAGATTGCAGTCAACATCGCCATCGACAAGTTGCTCCCATTACTAAATCAAGAAGCCAGACTATTGGGAGGCGTCCAAACACAAGTTGAAGACATTAAAACAGAGCTACTATATATTCAAGCTTTCCTAATGGATGCAGATGCAAAGGGGGAGAAAGCTGATGTCAGCCAAGGCCTTAAAACTTGGATTCAAGACTTAAGGGAGACTGCTTATTCCATAGAAGATCTGATTGATGAATACTTGCTTCACTTGGGAAATCCAAGTCGACGGCATAGATTCATTGGTTTCCGCTGCAAAGTTGGTCGCTTGATAAAAAAATTGAAACGACGCCATGAGATAGCCTCCAAGATCCGTGATATCCAGAAAAAAGTTGTTAAACTCAAAGAAACAAGTTCAACTTACGGCTTCATTAGTTCAGTTCAGCCGGGATCTGGAGGCAGTAGTATAAGTGCTCCATGGCATGACCCTCGGGTGACTTCCCTTTTCATAGATGAAGCTGAAATTGTTGGTATTGAATCTCAAAAAATTGAACTCACAAGCCGGCTGGTGGAGGGAACTCCAGAACGAACTGTAATTTCAGTGGTTGGCATGGGCGGACTTGGCAAGACCACTCTTGCCAACAAAGTATATGACAACAAGGAATTGGTGGGACACTTTGATTGCTCTGCTTGGATCACTGTGTCTCAGTCATTCAAGATGGAAGAGCTACTGCGGAACATGTCAATGAAATTCTATCAAGCAAGGAAGGAGCCAGTTCCTGAGGGTATCAATACCATGGACGAGTCCTCACTAATGACCTTAACCAGGCAATATTTACAAGATAAAAGGTATGTGGTTGTTTTTGATGATGTATGGAAACTAGATTTCTGGGGATTCATTAAATATGTTTTACCAGAAAATAAAAAAGGGAGCAGGATAATAATCACAACACGTAATGATGAGGTAGCTTCTTGTTGTAAAGAATCTTCATTTGATTACATCCACAAGCTGCAACCTCTGCCTCCAAAGAGCTCCTGGAAACTCTTTTGCAAGAAAGCGTTTCAGGGTGGATGTCCCCCGGAATTAGAGAAATTGTCTCATGATATTGTCAGAAGATGTGGTGGATTGCCACTAGCAATTGTAGCAATCGGTGGTCTTTTGTCAAGAAAAGAGAAGCTTGTCTCCGAATGGAAAAAATTTAGTGATACCCTAGGCTCTGAGTTACAAAGTAATTCGCATCTTGAAAGTATCAATACCATTCTCTCCCTCAGTTATCATGATCTGCCTTACCAACTCAAGTCCTGTTTCTTGTACTTTGCCATTTTCCCGGAAGACTGCACAATTAAGTGTAGACCACTTACTCGCCTATGGATTGCTGAGGGTTTTGTAAAAGCCAAGAGAGGTGTAACACTAGAAGAGGTTGCAGAAGAATTCTTGACCGAGCTCATACAAAGGAGCTTAGTTCTAGTGTCTGAGGTATTTGCTGATGGAAAAATTAGAAGCTGTCACGTTCATGACTTGATGCGTGAGATTATTCTCACAAAGGCCGAGGAGTTGAGTTTTTGTTGTGTGATGACTGGAGAAGAATCAAGTTTTGATGGAAGATTTAGGCGCCTATCACTTCATTATAGCTCAAATAATGTTGTAAACATTACTGGTAAAAAGTCTCACATCCGCTCCATTTTTCTTTACAACTCTCAGACGTTTTTTCTGGGGATATTGGCTTCAAAATTTAATCTTCTGGAAGTATTGCATCTTGATGATTCTGGTTTGGATAGCATTCCTGAAAATTTGGGAAATCTGTTGCATTTGAGGTACTTAAGCTTGAGGAATACAAAAGTGAGGATGCTTCCAAGGTCCATAGGTAAACTGCAAAACCTACAGACTTTGGATCTGAAATATACCCTTGTGGAGGATCTTCCTGTTGAGATCAATAGGCTCAAAAAGCTGCGCAATATTCTAGTCCAAAATTATGATTTTGATGTTGATTTGGGCTTGTTTTCTTTTAAAGGAGTGCATGTAAAGGAGGGTATTGGGTGTTTGGAAGAGTTGCAGAAGCTGTCCTGTGTGGAGGCAAACCATGGGGCGGGGGTAATTAAAGAGCTGGGAAAGCTGAGGCAGTTGAGGAAGCTGGAAATTATAAAACTTACTAGAGAAAATGGGGAGCATTTATGTGCCTCCATTACAAACATGAATCGCCTTGAATCTTTGTTAATTTCGTCATTGAGTGAAGACGAGACTCTGGATTTACAGTATATATCGCATCCACCCTCCTGTCTTTCACGTCTCCAGTTGTTCGGGCCTTTGGAGAAGTTACCTCACTGGATTTCTGAACTTCAAAATTTATCTATTGTAACCTTGTATGGTTCTAACTTGATGAATGATCCAGTGCAAGTCCTTCAAGCCTTGCCTAGCTTGCAGGAGCTTGCCCTTGTCCGTGACTCTGTTGTTGAGCAATTGTGTTTTGAGACCTCCGGGTTTCAGAAACTTAAGCTCTTATTTCTCCGTTTCTTGGTGGGACTGAAGAGGGTGAAAATAGAGAATGGAGCATTGCCCCAACTCAAGACGCTTAGAGTTGGGCCCTGCCCACAACTGGAGGAGATTCCCCCCGGCATCCGACACCTTACCAGACTTACAACTCTTGGATTTGATAATTTGCAGGAAGAATTGAAAGTAAGTATGATACCCACCCGGGGCAGAAATTATGAGATTGTTGAGCACATTCCAAACGTCCTCTTTCATGGGATTGAAACTCAGCCTACGAGAGCTAGCTGA 2760 0.4199 MAEIAVNIAIDKLLPLLNQEARLLGGVQTQVEDIKTELLYIQAFLMDADAKGEKADVSQGLKTWIQDLRETAYSIEDLIDEYLLHLGNPSRRHRFIGFRCKVGRLIKKLKRRHEIASKIRDIQKKVVKLKETSSTYGFISSVQPGSGGSSISAPWHDPRVTSLFIDEAEIVGIESQKIELTSRLVEGTPERTVISVVGMGGLGKTTLANKVYDNKELVGHFDCSAWITVSQSFKMEELLRNMSMKFYQARKEPVPEGINTMDESSLMTLTRQYLQDKRYVVVFDDVWKLDFWGFIKYVLPENKKGSRIIITTRNDEVASCCKESSFDYIHKLQPLPPKSSWKLFCKKAFQGGCPPELEKLSHDIVRRCGGLPLAIVAIGGLLSRKEKLVSEWKKFSDTLGSELQSNSHLESINTILSLSYHDLPYQLKSCFLYFAIFPEDCTIKCRPLTRLWIAEGFVKAKRGVTLEEVAEEFLTELIQRSLVLVSEVFADGKIRSCHVHDLMREIILTKAEELSFCCVMTGEESSFDGRFRRLSLHYSSNNVVNITGKKSHIRSIFLYNSQTFFLGILASKFNLLEVLHLDDSGLDSIPENLGNLLHLRYLSLRNTKVRMLPRSIGKLQNLQTLDLKYTLVEDLPVEINRLKKLRNILVQNYDFDVDLGLFSFKGVHVKEGIGCLEELQKLSCVEANHGAGVIKELGKLRQLRKLEIIKLTRENGEHLCASITNMNRLESLLISSLSEDETLDLQYISHPPSCLSRLQLFGPLEKLPHWISELQNLSIVTLYGSNLMNDPVQVLQALPSLQELALVRDSVVEQLCFETSGFQKLKLLFLRFLVGLKRVKIENGALPQLKTLRVGPCPQLEEIPPGIRHLTRLTTLGFDNLQEELKVSMIPTRGRNYEIVEHIPNVLFHGIETQPTRAS* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0877 919 FunFam Probable disease resistance protein At1g61300 156 325 - -
Vvi7g0877 919 Gene3D Ribonuclease Inhibitor 537 902 IPR032675 -
Vvi7g0877 919 Pfam NB-ARC domain 177 421 IPR002182 GO:0043531
Vvi7g0877 919 SUPERFAMILY L domain-like 499 881 - -
Vvi7g0877 919 PRINTS Disease resistance protein signature 193 208 - -
Vvi7g0877 919 PRINTS Disease resistance protein signature 273 287 - -
Vvi7g0877 919 PRINTS Disease resistance protein signature 368 382 - -
Vvi7g0877 919 PRINTS Disease resistance protein signature 617 633 - -
Vvi7g0877 919 Gene3D - 420 511 IPR036388 -
Vvi7g0877 919 CDD RX-CC_like 2 131 IPR038005 -
Vvi7g0877 919 Gene3D - 335 419 IPR042197 -
Vvi7g0877 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 434 IPR027417 -
Vvi7g0877 919 FunFam Probable disease resistance protein At5g66910 334 419 - -
Vvi7g0877 919 Pfam Rx N-terminal domain 5 98 IPR041118 -
Vvi7g0877 919 Gene3D - 4 116 - -
Vvi7g0877 919 Gene3D - 158 327 IPR027417 -
Vvi7g0877 919 FunFam Probable disease resistance protein At1g63360 420 509 - -
Vvi7g0877 919 PANTHER DISEASE RESISTANCE PROTEIN RP 31 841 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0877 Vvi-Chr7 11038146 11040905 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0877 169 847 WRKY Transcription Factor Family AT5G45050 23.370 5.10e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0877 K13457 - vvi:100251642 1796.17