Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0868 ATGTTCAAGCTTAGCAGTGGATTTCTCCCTCATGTGATTAAAAACTGCAAGTTTCTTGGGTTACTTCAATCGGTTGAACAAAATGAGTTTGTGCTGAAGTTTTGGAAGAGATCTCTGGATTCTTTAACATGGACAGAAATACAGCGTCAAGTTTTGGTTGCAACTGGTTTTGGTTCAAGAAAAGGTACCTTGCGGAAGGAAGCCCTTGATAAGGAACTGAATCCTATGGTAAAGTATGGCTTACATCCTGGTACTTTGAAGGGTGAACTGTTTAGTATTTTATTGAATCAAGGAAATAATGGTATGAAAGTTCCAGACTTAGCAAGGTGTGTGCAGATTTCTGAATTGAATCTTGCTGGCACGACTGAGGAGCTAGAACTTCTAATATATTCTACTCTTTCAAGTGACATTACATTATATGAAAAGATTTCTAGCTCTTCATATTGTCTACGCATTACTTCTCACATAAATGAAGCTGAAAATTTTCAATCAGATACTGATGACTCTGGAAGCATTGACGATGACTCTAAGGACAACAGAAAATATAGCAGTAACAATGATTCTGACTCTGATTCAAGAACTCCAAATTTAGGGAAACTGAATTATATGAACCATCATAAACAGAGAAAGGGCATGTTGACTATATATACTGAAATTGATGAGACCTATCCAGGAGAAGTATGGTTATTAGGATTGGTGGAGGGTGAATATTCAGATTTAAGCATTGAAGAGAAGCTCAATGCCTTAATGGCTTTGGTTGATCTTGTTAGTGGTGGAAGCAGTATCAGAATGGCATGA 798 0.3709 MFKLSSGFLPHVIKNCKFLGLLQSVEQNEFVLKFWKRSLDSLTWTEIQRQVLVATGFGSRKGTLRKEALDKELNPMVKYGLHPGTLKGELFSILLNQGNNGMKVPDLARCVQISELNLAGTTEELELLIYSTLSSDITLYEKISSSSYCLRITSHINEAENFQSDTDDSGSIDDDSKDNRKYSSNNDSDSDSRTPNLGKLNYMNHHKQRKGMLTIYTEIDETYPGEVWLLGLVEGEYSDLSIEEKLNALMALVDLVSGGSSIRMA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0868 265 PANTHER HOMEOBOX PROTEIN SIX 14 264 - -
Vvi7g0868 265 MobiDBLite consensus disorder prediction 173 187 - -
Vvi7g0868 265 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 226 263 IPR028942 -
Vvi7g0868 265 MobiDBLite consensus disorder prediction 162 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0868 Vvi-Chr7 10786790 10787628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0868 30 263 Homeobox Transcription Factor Family AT1G28420 26.347 3.30e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0868 - - vvi:100241125 439.499