Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0834 ATGATTGTTGCAGGCCCATCCATTGATGGGAACTCCATGTATGATGACATTATTGGGAACGATCTCCTTTCCGATTACAAATGTGGTGAACCAAGTATGTTGTTTAGTGTCGCTGATACGTTAAACAGAGCCATCACAATGCCTGGTTTAGGGAAGCAGTTGAGGCATGGGAAGCGCTATCGGTATGTCAGCTCTCATGATGTGGTACATTGGACACGTAGTTTTATGCCGGATTTGAAGCGGGCATGCAAAGATCACTACAGTAAACATTGCTGGAGCACTGGTTTTAGCCTGAGTTTCAGAATTGTTGCTCTTTCTCCCAGTTTTAAGAATCTTTCCTTGGACCATTTTGTCAAAACATATAAGAGGGCGAATAGAAGGGCGACGCTTCTGGACCATGATGGGACTGTAGTTCTGCAATCTTCCATTGTTAAAACTCCTGGCCTTGAGGACTTAGGAACAGCATCAGAGCATGGATACTTCATTAAGTGGAATCAGAATTTTAATCGGGAATCAAGTCCTTTACTCATGGACTTTGACTGA 543 0.4328 MIVAGPSIDGNSMYDDIIGNDLLSDYKCGEPSMLFSVADTLNRAITMPGLGKQLRHGKRYRYVSSHDVVHWTRSFMPDLKRACKDHYSKHCWSTGFSLSFRIVALSPSFKNLSLDHFVKTYKRANRRATLLDHDGTVVLQSSIVKTPGLEDLGTASEHGYFIKWNQNFNRESSPLLMDFD* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0834 180 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 146 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0834 Vvi-Chr7 9969828 9970370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0834 36 172 Trehalose Biosynthesis Gene Families AT1G23870 44.767 8.51e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0834 K16055 - vvi:100251811 210.69