Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0817 ATGGAGCTTCAACTTTTCTTCTTCGTCTTCTTCTTCTTTTTCTTCATAGTTTCATCCATCTCTCTCATTGATTCCCCTTCTTCTTCTTCTTCTTCTTCTTCGGATGTTGAGCTTTTGTTGAACAAGATCAAGCCTTCGCTTCAAGGCAGCTACTCGGATAATCTCCTTCTATCTTCGTGGAACACCTCTGTGCCACTCTGCCAATGGCGGGGCCTTAAGTGGGTCTTCTCCAACGGCTCTCCTCTCCTCTGCACTGACCTGTCCTCTCCTCACTGGACCAACCTCTCTCTCTCCAAAGACCCTTCTCTCCACCTTCTTTCTCTTCAGCTCCCTTCTGCTAATCTTACTGGCTCACTTCCCAAGGAGCTCGGGGAGCTTTCTGCGCTCCAGAGCCTCTACCTCAATGTCAACTCGCTCACTGGGACTATCCCTTTGGAGCTCGGTTACAGCCCTTCTCTCTCCGACCTCGATTTGGGGAATAATCAGTTGAGTGGAGCTCTCACCCCGGCGATTTGGAACCTTTGTGACCGGCTCGTTTCTCTGAGGCTTCACGCCAATCGGCTATCTGGGTCTGTGCCAGAACCTGTTTTACCCAACTCCACTTGCAATAATTTGCAGTTTCTTGATTTGGGTGACAACCAGTTTTCCGGGTCGTTTCCGGAGTTTGTCACCAGGTTTGATGGCCTCAAAGAGCTTGATCTTGGGAACAATTTGTTTTCTGGATCGATTCCGGAGGGTTTGGCCAAGTTGAATCTTGAGAAATTGAACCTTTCGTACAATAATTTTAGTGGAGTGTTGCCAGTTTTTGGTGAATCCAAGTATGGAGTGGAGGTCTTTGAAGGGAACAATGCTGGGCTTTGTGGGTCTCCTCTGAGGAGTTGCAAGAGCAACTCAGGATTGAGCCCCGGGGCAATCGCCGGGATTGTGATCGGTTTGATGACCGGATCAGTAGTCCTAGCTTCATTACTAATTGGGTATGTGCAGGGGAAGAAGAGGAAGAGTAGGGGAGAAAACGAGGAGGAATTCGAGGAAGGCGAAGATGACGAAAATGGCAGTGGAGGAAGTGGAGATGGGAAGCTTATACTGTTTCAGGGAGGCGAGCATTTGACACTGGAGGACGTGTTGAATGCAACGGGGCAAGTGATGGAGAAGACGAGCTACGGGACAGTGTATAAAGCAAAGCTTGCAGATGGAGGGAGCATTGCGTTGAGGCTACTGAGGGAAGGCAGTTGTAAGGATAGTAATTCGTGTTTGCCGGTGATAAAGCAATTGGGAAGGGTTAGGCATGAGAATTTGATTCCATTGAGAGCTTTCTATCAGGGGAAAAGAGGGGAGAAGCTTCTCATCTATGACTATCTGCCCAACAGATCCCTCCATGACCTCTTGCATGAGACTAGAGCAGGAAAACCAGTGCTGAACTGGGCTCGGCGACACAAGATTGCATTGGGTATAGCCAGGGGGCTAGCATTTCTTCATACAGTTGAAGCACCTATTACTCATGGGAATGTGAGATCCAAGAATGTACTTATAGACGAATTTTTTGTGGCCAGGCTTACTGAGTTTGGGCTTGACAAAGTAATGGTTCCAGCTGTAGCAGATGAAATGGTGGCACTTGCAAAAACTGATGGTTACAAGGCACCAGAGCTTCAAAAGATGAAGAAATGCAATTCCAGGACAGATGTTTATGCATTTGGGATACTGTTGTTGGAGATATTGATAGGAAAGAAGCCTGGGAAAAATGGAAGAAGTGGTGATTTCGTGGATTTGCCCTCAATGGTCAAAGTGGCCGTTCTAGAGGAGACCACCATGGAGGTTTTCGATGTGGAAGTTTTGAAGGGAATAAGGAGTCCAATGGAGGAAGGGTTGGTTCAAGCATTGAAGCTTGCAATGGGTTGCTGTGCTCCTGTAGCTTCAGTTAGACCCACAATGGATGAGGTTGTGAAGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCTTTGTACAGCCCCAGTGAAACAAGGAGTGAAATTGGACAAAAAGCAGAAGATCTTGATGCTAAATAA 2046 0.4746 MELQLFFFVFFFFFFIVSSISLIDSPSSSSSSSSDVELLLNKIKPSLQGSYSDNLLLSSWNTSVPLCQWRGLKWVFSNGSPLLCTDLSSPHWTNLSLSKDPSLHLLSLQLPSANLTGSLPKELGELSALQSLYLNVNSLTGTIPLELGYSPSLSDLDLGNNQLSGALTPAIWNLCDRLVSLRLHANRLSGSVPEPVLPNSTCNNLQFLDLGDNQFSGSFPEFVTRFDGLKELDLGNNLFSGSIPEGLAKLNLEKLNLSYNNFSGVLPVFGESKYGVEVFEGNNAGLCGSPLRSCKSNSGLSPGAIAGIVIGLMTGSVVLASLLIGYVQGKKRKSRGENEEEFEEGEDDENGSGGSGDGKLILFQGGEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGGSIALRLLREGSCKDSNSCLPVIKQLGRVRHENLIPLRAFYQGKRGEKLLIYDYLPNRSLHDLLHETRAGKPVLNWARRHKIALGIARGLAFLHTVEAPITHGNVRSKNVLIDEFFVARLTEFGLDKVMVPAVADEMVALAKTDGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGDFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRSALYSPSETRSEIGQKAEDLDAK* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0817 681 Pfam Leucine rich repeat 204 262 IPR001611 GO:0005515
Vvi7g0817 681 Gene3D Ribonuclease Inhibitor 34 197 IPR032675 -
Vvi7g0817 681 ProSiteProfiles Protein kinase domain profile. 376 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0817 681 MobiDBLite consensus disorder prediction 334 354 - -
Vvi7g0817 681 FunFam Leucine-rich repeat receptor-like protein kinase 202 294 - -
Vvi7g0817 681 SUPERFAMILY Protein kinase-like (PK-like) 381 651 IPR011009 -
Vvi7g0817 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 195 IPR046959 -
Vvi7g0817 681 SUPERFAMILY L domain-like 66 269 - -
Vvi7g0817 681 Gene3D Transferase(Phosphotransferase) domain 1 453 672 - -
Vvi7g0817 681 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 101 192 - -
Vvi7g0817 681 Gene3D Phosphorylase Kinase; domain 1 361 452 - -
Vvi7g0817 681 Gene3D Ribonuclease Inhibitor 198 296 IPR032675 -
Vvi7g0817 681 Pfam Protein tyrosine and serine/threonine kinase 380 650 IPR001245 GO:0004672|GO:0006468
Vvi7g0817 681 MobiDBLite consensus disorder prediction 654 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0817 Vvi-Chr7 9539484 9546206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0817 1 670 Receptor kinase-like Gene Family AT3G24660 72.660 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vvi7g0817 PK_Tyr_Ser-Thr 3.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0817 - - vvi:100254567 1227.62