Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0803 ATGGGGTGGCCCAAGGAATCAAGGGATATGGACTATCCTTTATGGACAAGACTATATATGTTTGTAGTGGGAGTGACCAATCCTAAAGATGGAACTTTTCACTTGGTTACTTTGTCCCAAGGGTCATTACTTCCTATATTACAAAAAACACATGTGCGGCTTACAAATCTTCTAGGTGAGGGATCAAGCCTTACTATACACTGTAAATCCAAAGATGATGATCTTGGAGTACATGTACTCCCCTTTAAGGGCTCATTCGAGTGGTCTTTCAAACCCAATTTCTTTGTAAAGAATACACTTTTCTTTTGTAACATTCAATGGCAAGGTAAGTCGATGTACTTCAATAGTTATGACGAAGAGAGGGATCTTGATGGTTGCGGTAAATACTGCTATTGGGATGTAACCCTCAAGGGTCCATGCTTACTTAAACATAAAGGTGGTTACGACTTCTGCAGTGACTGGCCAAACAAAAAAAGTGTAGGAATCAAGCAAGGAGATGACAAGAATATGCCCTGA 516 0.4012 MGWPKESRDMDYPLWTRLYMFVVGVTNPKDGTFHLVTLSQGSLLPILQKTHVRLTNLLGEGSSLTIHCKSKDDDLGVHVLPFKGSFEWSFKPNFFVKNTLFFCNIQWQGKSMYFNSYDEERDLDGCGKYCYWDVTLKGPCLLKHKGGYDFCSDWPNKKSVGIKQGDDKNMP* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0803 171 PANTHER - 46 144 IPR010264 -
Vvi7g0803 171 Pfam Plant self-incompatibility protein S1 51 154 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0803 Vvi-Chr7 9287184 9296931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0803 49 154 Carbohydrate Esterase AT3G16970 36.937 1.56e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0803 - - vri:117917719 296.975