Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0766 ATGGCGACGATGAAAAGGCCTAGAGATGGAGATGAAGATGAGGGCAGTTACCCATCGATCAGAAGGTGCATTCCCAGGAGCCGCTTTCATGGAGGTCTGGACACTTCTCATGGTGTCACCTGGCTTCGCGGCCACAAGCTGGGCCAAGGAAGCTTTGCATCCGTATACTCTGCAACATCCGCATCAAAATCACCGGTTGTTTTTGTTGATGATGATGGCGGCAGTTGCATCTTGCCCTCTGAATTGGCCGTGAAATCAGCGGAAATCTCCAAATCGTCATCCCTCCGCAGCGAGATGGAGATTCTTTCTAATCTGAATTCGAGCTCGTATGTAGTGCGCTGTTATGGGGATGAAATCACAACGTCGGGTGATGGAAAACTTTATTACAACATATTGCTGGAGAAGTGTTGTGGGGGTAGTTTGCGTTGTCGGATCAGGAATTCTGGCGGCGTTGGATTACCGGAAAAGGAGATGAGGAGCTATACTCGGGATATAGTTCGAGGACTTTGTTATGTTCATGGCCATGGTTATACCCACTGCGACATCAAACCCGAAAACATCCTGCTGGTGCCGACTTCTTGCAATGGTTTGAGAGCGAAGATCGGTGATTTTGGGTTGGCCAAGAAAGAGTATTTTGACCATGAGGAAGAGAATGAGGATGACAAGGGATGCGGTGGGTTGAGAGGTACGTATCGGTATATGTCCCCTGAATTAGTGGCAGATAACATGCAGTGTTGGCTTTCAGACATATGGGCCCTTGGTTGCGTCATCATAGAGATGATGAGTGGGAAGCTGGTATGGAGTTGTGAACAAATTGATTCAGATATGAGAGATGGGAAGCAACAATTTGATTCAGATATGAGAGACGTTTTGATGCGGATAGCTTACAGTACTGAGCTCCCTGAATTTCCAAGTACCATTTCAGAGCAAGGGAAGCACTTCTTGGAAAGGTGTCTTGACAGGGATATTGATGAGAGGTGGTCAGCCCTGATGCTCTTGCGCCACCCTTTTCTTTCACAAGATGATCCGAGATTGTAA 1038 0.474 MATMKRPRDGDEDEGSYPSIRRCIPRSRFHGGLDTSHGVTWLRGHKLGQGSFASVYSATSASKSPVVFVDDDGGSCILPSELAVKSAEISKSSSLRSEMEILSNLNSSSYVVRCYGDEITTSGDGKLYYNILLEKCCGGSLRCRIRNSGGVGLPEKEMRSYTRDIVRGLCYVHGHGYTHCDIKPENILLVPTSCNGLRAKIGDFGLAKKEYFDHEEENEDDKGCGGLRGTYRYMSPELVADNMQCWLSDIWALGCVIIEMMSGKLVWSCEQIDSDMRDGKQQFDSDMRDVLMRIAYSTELPEFPSTISEQGKHFLERCLDRDIDERWSALMLLRHPFLSQDDPRL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0766 345 CDD STKc_MAPKKK 41 338 - -
Vvi7g0766 345 SUPERFAMILY Protein kinase-like (PK-like) 41 342 IPR011009 -
Vvi7g0766 345 ProSiteProfiles Protein kinase domain profile. 41 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0766 345 Gene3D Phosphorylase Kinase; domain 1 45 129 - -
Vvi7g0766 345 Pfam Protein kinase domain 44 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0766 345 Gene3D Transferase(Phosphotransferase) domain 1 130 343 - -
Vvi7g0766 345 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 32 340 - -
Vvi7g0766 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Vvi7g0766 345 SMART serkin_6 41 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0766 Vvi-Chr7 8105826 8106863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0766 41 342 MAP Kinase Kinase Kinase AT4G36950 41.060 5.82e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vvi7g0766 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0766 - - vvi:100259935 717.227