Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0765 ATGGAGATTCTTTGTGATCTGAATTCCAGCTCGTATGTGGTGTGCTGTTATGGGAACGAAATCACAAGGTCGGGTGATGGAAAACTTTACTACAATATACTGCTGGAGAAGTGTTGTGGGGGTAGTTTGGGAAGTCGGATCAGGAACTCTGGTGGGGTTGGATTACCGGAGAATGAGGTGAGGTGCTATACCCGGGATATAGTTCGAGGACTGTGTTATATTCATGACCATGGTTATGTCCACTGCGACATCAAACTAGATAATATCCTACTTGTGATGACTTGTTGCAATGGTTTGAGAGCAAAGATCGGTCATCTTGGGTTGGCCAAGGAAGCCTATTATAACCCTGTGGATGAGGATGATGATGATGAGGGATGCAGTGGGATGAGAGGTACTTTCCGATATATGTCTCCTGAATTAGTAGAGCATATAAGGTGCAGTGTTGGCTTTCAGACATATGGGCACTTGGTTGCATCGTGA 480 0.45 MEILCDLNSSSYVVCCYGNEITRSGDGKLYYNILLEKCCGGSLGSRIRNSGGVGLPENEVRCYTRDIVRGLCYIHDHGYVHCDIKLDNILLVMTCCNGLRAKIGHLGLAKEAYYNPVDEDDDDEGCSGMRGTFRYMSPELVEHIRCSVGFQTYGHLVAS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0765 159 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
Vvi7g0765 159 Pfam Protein kinase domain 3 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0765 159 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0765 159 SUPERFAMILY Protein kinase-like (PK-like) 2 147 IPR011009 -
Vvi7g0765 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Vvi7g0765 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0765 159 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0765 Vvi-Chr7 8087930 8088409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0765 2 143 MAP Kinase Kinase Kinase AT4G36950 43.662 3.63e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vvi7g0765 Pkinase 8.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0765 - - vvi:104879856 342.428