Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0755 ATGAGGGTTGTGTTGCTGCTGCTGCTTCTCCATCTCGTCAATTTGGTTCTGTCTTGTTGCGGGCATCCATTATTGCATATATTCCTGTCTCCAACAATACTGCCTAAACAGCAACAGTCTACGAGGAAAATCTCATTGGAACAGGCAAGGCCCATGCCAATGAGTGTTTTGTTTACTTTATCTAGATCACCCCGGACGCGGGTGTTTAAGCCTTCTTTGGAGCCATCAACTGCCCCTGCACCTTCTCCAGCATATCACGGCTCTGTCTCTGGTCCTAGCAGTACTACCATACCAAGACATCATCACCATCATCATCATCATTATCATCATCATCAGGGGAAACAACATCATGCAGTCTCTCCAGCCCCCTCTACAGGAACAGGTTGTGATCAGATTTGTACGGAGCCTCTTGCAGCAACTCCATTTGGTTCCCCTTGTGGTTGTGTGTTTCCTATGAAAGTTAGACTTCTTCTGGATGTAGCCCTTTATGCTGTCTTTCCTGTGGTTGCTGAGCTAGCAATTGAGGTTGCAGCAGGCACATATCTGGAGCAGAGTCAAGTGAAGATAGTGGGCGCCAGTGCTGACAGTCAAAATCAGGGAAAGACAGTAGTAGATATTAACTTGGTTCCACTGGGAGAGAAGTTTGATAACACCACTGCTATGCTGACATGTGAGAGATTTTGGCAGAAGAAAGTGCCTCTAAATAGGACTCTTTTTGGTAACTATGATGTGTTGTACATTAATTATCCAGGGATTCCTTCTTCACCGCCATCTGGAAGTTACATGGGCAGTGGTCCAAGTGGAAGTGCTGGAGGTCTCCCCATAACTGCAGATTTTGTCAACAAGAGCCAGAAGTTGAATCCTAGAACCATTGCCATCATCGCTTTATCTGGTTTTGTGCTTGTATTGGTGTGCATTGGAGCAATTTCCATTGTTTTAAAATGGAGAAAGATTGGAAGACCATCAAGTGCTGTTGGTCCTGTATTTACATCATCCATCAATAAGAGATCTGGCATTGGTTCTATGTTATCAAGTAGCATAGCAAGTTCAACATCAGCATCCCTCATTTCCACCATGGCTACATGTGTTCTCTCTGTTAAAACATTTCCACTTGCTGAACTTGAGAAGGCAACACATAAGTTCAGTTCAAAGAGGATTTTAGGTGAAGGAGGATTTGGACGTGTTTACCATGGGACTATGGAAGATGGAACTGAAGTTGCAGTTAAGCTGCTTACAAGAGATCACCAGAGCGGAGATCGTGAGTTCATTGCTGAAGTTGAGATGCTCAGCCGATTACATCACCGCAATCTTGTGAAACTGATTGGTATATGCATTGAAGGACACACACGCTGCCTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCTCACTTGCATGGTGCTGACAAGGGAAAGGGACCTCTCGACTGGGATGCACGGATGAAGATTGCCCTTGGTGCAGCAAGAGGATTGGCTTATCTTCATGAAGATTCTAATCCTCGTGTAATTCACCGAGATTTTAAGGCCAGCAATGTCCTACTAGAAGATGATTTCACCCCAAAGGTTTCGGATTTTGGGTTGGCAAGGGAAGCAACAGAAGGAAGTCATCATATATCTACTAGGGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCAATGACGGGGCATCTACTTGTCAAAAGTGATGTATACAGTTATGGGGTCGTGTTGCTTGAGCTTCTCTCTGGAAGAAAACCAGTTGACATGTCCCAACCACCAGGACAGGAGAACCTAGTAACCTGGGCACGGCCTCTGTTGACTGTTAGAGAAGGTTTGGAGCAGTTGGTGGATCCTTCTTTGGCTGGAAACTACGACTTTGACAACGTGGCTAAGGTTGCAGCCATTGCTTCCATGTGTGTTCACCCTGAGGTGACTCACAGACCCTTCATGGGTGAAGTAGTGCAGGCACTAAAACTGATTTACAACGACAAAGACGAGACTTGTGGGGATTGTTGTAGTCAGAAGGAATCTTCAGGTCCGGACTCAGATTTGAGAGGTGATCTTGACCCTTCTGATAGCAGTTGGTGGAATGCTGGAGGGATCACCCCACGCTTGACATACGGGCATGCCACGCCGTTCATAACCATGGAGTACAGCTCCGGTCCCCTTGAGGAGACGGAAAACAGACCGTTTTCAGCTTCAAGCCTGGTGGGGGAAGGGGCATCCTTACAAATCACACATGGGAACAGATCAGGGCCATTGAGAACAATCCGAAGCAAGCCAGGGTTCTATAGATTAAAAGGGAGTATGAGTGAACATGGGGTGCTTTCAAAGCGAGTTTGGAATGATGGTGCTTGGGTTTGA 2352 0.4613 MRVVLLLLLLHLVNLVLSCCGHPLLHIFLSPTILPKQQQSTRKISLEQARPMPMSVLFTLSRSPRTRVFKPSLEPSTAPAPSPAYHGSVSGPSSTTIPRHHHHHHHHYHHHQGKQHHAVSPAPSTGTGCDQICTEPLAATPFGSPCGCVFPMKVRLLLDVALYAVFPVVAELAIEVAAGTYLEQSQVKIVGASADSQNQGKTVVDINLVPLGEKFDNTTAMLTCERFWQKKVPLNRTLFGNYDVLYINYPGIPSSPPSGSYMGSGPSGSAGGLPITADFVNKSQKLNPRTIAIIALSGFVLVLVCIGAISIVLKWRKIGRPSSAVGPVFTSSINKRSGIGSMLSSSIASSTSASLISTMATCVLSVKTFPLAELEKATHKFSSKRILGEGGFGRVYHGTMEDGTEVAVKLLTRDHQSGDREFIAEVEMLSRLHHRNLVKLIGICIEGHTRCLVYELVHNGSVESHLHGADKGKGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPPGQENLVTWARPLLTVREGLEQLVDPSLAGNYDFDNVAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDKDETCGDCCSQKESSGPDSDLRGDLDPSDSSWWNAGGITPRLTYGHATPFITMEYSSGPLEETENRPFSASSLVGEGASLQITHGNRSGPLRTIRSKPGFYRLKGSMSEHGVLSKRVWNDGAWV* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0755 783 MobiDBLite consensus disorder prediction 97 116 - -
Vvi7g0755 783 Pfam Protein tyrosine and serine/threonine kinase 384 652 IPR001245 GO:0004672|GO:0006468
Vvi7g0755 783 SUPERFAMILY Protein kinase-like (PK-like) 366 653 IPR011009 -
Vvi7g0755 783 MobiDBLite consensus disorder prediction 668 687 - -
Vvi7g0755 783 FunFam Receptor-like serine/threonine-protein kinase ALE2 457 673 - -
Vvi7g0755 783 Gene3D Transferase(Phosphotransferase) domain 1 457 674 - -
Vvi7g0755 783 MobiDBLite consensus disorder prediction 69 123 - -
Vvi7g0755 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Vvi7g0755 783 PANTHER OS01G0750732 PROTEIN 127 678 - -
Vvi7g0755 783 ProSiteProfiles Protein kinase domain profile. 381 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g0755 783 FunFam receptor-like serine/threonine-protein kinase ALE2 354 456 - -
Vvi7g0755 783 CDD STKc_IRAK 387 656 - -
Vvi7g0755 783 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Vvi7g0755 783 Gene3D Phosphorylase Kinase; domain 1 354 456 - -
Vvi7g0755 783 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0755 Vvi-Chr7 7953044 7978732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0755 132 771 Receptor kinase-like Gene Family AT5G56890 54.737 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vvi7g0755 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0755 - - vvi:100265222 1476.07