Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0752 ATGGCCAACCTATTAAAGTCTTTGTACTTCCATATTCACCAATACAGCCAAATCCCAGGAGAAGCTCCACCGATCATTGAGAACTCTCACCCTCCATCCTCGTGGCCAGAGAATGGAACAATTGAACTGATTGATCTAAAGGTCCGCTACAAGGAAAGTCTTCCTGTTGTGCTTCATAGTGTAACCTTCAAATTTCCTGGTGGTAATAAAATTGGAATTGTTGGGCGTACTGGAAGTGGTAAATCGACTTTGATCCAGGCGCTATTCCGAATGATTGAACCAGCAGGTGGGAAGATCATAATTGTCAACATTGATATTTCAACAATTGGCCTTCATGACATTCATAGCCGTCTGAGTATAATACCTCAAGATCCTACCTTGCTTGAAGGGACAATTAGAGGCAATCTTGATCCCCTTGAAGAGCTCTCAGACCAGGAAATTTGGCAGGCACTTGATAAGTCTCAGCTTGGGGATGTAATCCGCCAAAAAGAGCAAAAGCTTGATACGCCAGTGCTCGAGAATGGAGATAATTGGAGTGTTGGGCAAAGGCAACTGGTTTCCCTGGGCCAGGCTTTGCTTAAACAGGCAACAATTTTGGTGCTTGATGAAGCGACTGCTTCAATTGATACAGCCACAGATAATCTTATCCAGAAGATTATCCGAACTGAATTCCAGAACTGCACTGTATGCACTATTGCGCATCGGATCCCAACCATTATCGATAGCGATCTTGCTCTGGTCCTCAGTGATGGTCGAGCTGCAGAGTTTGATACGCCAGCACGACTATTAGAGGACAAATCATCCATGTTCCTGAAGTTGGTCACCAAGTACTCATCCAGGTCAAGTGGCATCCCAGATTCTTGA 864 0.4468 MANLLKSLYFHIHQYSQIPGEAPPIIENSHPPSSWPENGTIELIDLKVRYKESLPVVLHSVTFKFPGGNKIGIVGRTGSGKSTLIQALFRMIEPAGGKIIIVNIDISTIGLHDIHSRLSIIPQDPTLLEGTIRGNLDPLEELSDQEIWQALDKSQLGDVIRQKEQKLDTPVLENGDNWSVGQRQLVSLGQALLKQATILVLDEATASIDTATDNLIQKIIRTEFQNCTVCTIAHRIPTIIDSDLALVLSDGRAAEFDTPARLLEDKSSMFLKLVTKYSSRSSGIPDS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0752 287 Gene3D - 25 277 IPR027417 -
Vvi7g0752 287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 275 IPR003439 GO:0005524
Vvi7g0752 287 Pfam ABC transporter 58 206 IPR003439 GO:0005524
Vvi7g0752 287 CDD ABCC_MRP_domain2 39 259 - -
Vvi7g0752 287 SMART AAA_5 67 252 IPR003593 GO:0016887
Vvi7g0752 287 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 12 278 - -
Vvi7g0752 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 272 IPR027417 -
Vvi7g0752 287 FunFam ABC transporter C family member 3 24 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0752 Vvi-Chr7 7912161 7916289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0752 39 274 Calmodulin-binding Proteins AT2G36910 30.544 5.24e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0752 - - vvi:100258320 519.62