Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0746 ATGGCTACCACAGGCCAGGTCATCACCTGCAAAGCTGCGGTGGCATGGGAAGCGAATAAGCCGCTGGTGATCGAGGATGTGCAGGTGGCACCGCCGCAGGTCGGCGAGGTTCGGATCAAGATACTCTTCACTGCTCTCTGCCACACTGATGCTTATACTTGGAGTGGCAAGGATCCTGAGGGTCTCTTTCCGTGTATTCTTGGGCATGAGGCTGCTGGGATTGTAGAGAGTGTTGGTGAAGGTGTAACTGAAGTTCAACCAGGGGATCATGTTATACCCTGTTACCAGGCAGAATGTAGAGAATGCAAATTCTGCAGATCACGGAAGACAAACCTCTGTGGCAAATTTCGGGCATATGATGAGTGA 366 0.5164 MATTGQVITCKAAVAWEANKPLVIEDVQVAPPQVGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCRSRKTNLCGKFRAYDE* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0746 121 PANTHER ALCOHOL DEHYDROGENASE 5 118 - -
Vvi7g0746 121 Gene3D - 13 118 - -
Vvi7g0746 121 Pfam Alcohol dehydrogenase GroES-like domain 35 117 IPR013154 -
Vvi7g0746 121 SUPERFAMILY GroES-like 3 118 IPR011032 -
Vvi7g0746 121 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0746 Vvi-Chr7 7804446 7806111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0746 36 115 Monolignol Biosynthesis Gene Families AT4G37970 34.568 5.00e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0746 K00121 - vvi:100258412 251.521