Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0739 ATGCTTCCAAGGGGGGGACGAGCCTACTCCTACCCTCATGGCCTCAATATGCCTGATTCTCCAATGCTAGGTGTAGTTGGAGGCATGCTTTCAATTCCTTATGACAAGGGTGGCATGCCACTTCGTGATGCTGCAACTGCACAACCAATACTCATTTCATCTTGGGCTTCAACTCATGCAAGTGTAGCATCTGATCAGCAAAGAACAATGTTGGGTGAAAGTTTGTACCCTTTTTTGGATCAGTTGGAGAATGAGATGGCAGTTAAAGTGATAGGCCCGTTTCTGGAGGTGGACCAGACTGAGGGTTTGCATCTGTTTGAGTCGCTAGAGGTTTGA 336 0.4732 MLPRGGRAYSYPHGLNMPDSPMLGVVGGMLSIPYDKGGMPLRDAATAQPILISSWASTHASVASDQQRTMLGESLYPFLDQLENEMAVKVIGPFLEVDQTEGLHLFESLEV* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0739 111 SUPERFAMILY PABC (PABP) domain 6 109 IPR036053 GO:0003723
Vvi7g0739 111 SMART poly_2 63 111 IPR002004 GO:0003723
Vvi7g0739 111 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 51 111 IPR002004 GO:0003723
Vvi7g0739 111 Gene3D - 47 111 - -
Vvi7g0739 111 Pfam Poly-adenylate binding protein, unique domain 61 108 IPR002004 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0739 Vvi-Chr7 7754851 7755186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0739 1 111 Eukaryotic Initiation Factors Gene Family AT2G23350 50.893 3.14e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0739 K13126 - vvi:100255846 154.066