Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g0733 ATGGGTATCGTTCTTCTGCTGAGTAAATTCATATCGTCATCTTCCCTCACCTCCTCATCTCATACCCTGTTGAGAGCAATTAACGGGTTGCCCATATTGGAGCTGTCATCAATTTGCATCAATTTGACATTATTCCTTGTGTTTCTCTTCATCGTATCAGCTCGTCAATTTTTCGTATGTATTGGTCGAGTTCGAATAATTAAGGATGATTCTGGGGCGAATTCTAACCCAATTCGGCGTAGTATTGATAGGGAGATTCGCGATATTGAGATTGGTAAGGGTTTCATAGCTACGGTGTCCTGCTGTTTCTATGTTTTGTTATTGCAAGTTTTGGTGTTAGCCACTGATGGGATTGGCCTAATCAGAGGGGCTTTGATTGGGAAAACTGCAAATTGGTCGCTTCTTTGCTTACCTGCAGCTCAATTCTTAGCTTGGTTCGTGTTGAGCGTTTCGGCTCTCCATTGTAAATTTAAGGTGTCTGAGAAGTTCCCTTTGCTGCTGAGGGTGTGGTGGTTTGTTTCATTTATCATTTGGTTGTGTTCAGTTTATGTTGATGCCAAAGGGTTCTTCAGAGAAGGTTTAAACCATGTGAGTGCACATGTTTTGGCAAATTTTGCTGCTTCCCCTGCCCTTGCTTTTCTGTTTTTTGTTGCAATTCGGGGTGTTACTGGTATACAAGTGCGCAGAAACTCTGATCTTCAGGAGCCATTGCTGCCTGAAGAAGAAGCAGGGTGTCTTAAGGTCACACCTTATAGTGAAGCTGGGCTCTTTAGTTTGGTCACACTTTCGTGGCTGAACCCACTGCTTTCAGTTGGGGCAAAGAGACCACTTGAGCTAAAGGACATTCCCCTTCTTGCACCGAAAGACCGTGCCAAAACTAATTATAAGGCTTTGAATTCGAATTGGGAGAAATTGAAGGCTGAGAATACATCAAAACAGCCTTCTTTAGCTTGGGCAATTCTCAAGTCATTTTGGAGGGAGGCAGCTTGTAATGCCGTCTTTGCTGGTCTGAATACTCTTGTTTCCTATGTGGGTCCTTACATGATTAGCTATTTTGTGGATTACTTAGGAGGAAATGAGACCTTTCCTCATGAGGGATATATTCTTGCTGGAATATTCTTCTCAGCAAAATTGGTGGAGACCTTAACTACAAGGCAGTGGTATCTTGGGGTTGATATTTTGGGCATGCATGTGAGATCGGCTCTAACTGCAATGGTTTATCGCAAAGGACTAAGGCTCTCGAGCTCAGCCAAGCAAAGCCATACCAGTGGGGAGATTGTGAACTATATGGCCGTTGATGTTCAGAGAGTGGGGGACTACTCTTGGTATCTTCATGACATTTGGATGCTTCCCCTGCAAATAATTCTTGCCCTCGCGATTCTATATAAAAATGTTGGAATTGCTTCTGTTGCTACATTCATTGCCACCATTATATCAATTGTTGTTACTGTTCCACTTGCAAAACTGCAAGAAGATTATCAGGACAAATTAATGGCTGCCAAGGATGATAGGATGAGGAAGACTTCAGAGTGCCTGAGGAACATGAGGATTCTCAAGTTGCATGCTTGGGAGGACAGGTATCGAATGAAGCTGGAGGAAATGCGTCATGTGGAGTTCCACTGGCTCCGGAAAGCTCTCTACTCGCAGGCTTTTGTTACATTCATTTTCTGGAGCTCACCCATTTTTGTTGCTGCCATCACCTTTGGTACTTCAATTTTGTTGGGTACTCAGCTCACAGCAGGAGGTGTTCTTTCTGCTCTGGCCACTTTCAGAATCCTTCAAGAACCGCTTAGGAATTTCCCCGACTTGGTCTCAATGATGGCTCAGACAAAGGTTTCTCTTGATCGAATTTCTGGATTCTTGCAGGAGGAAGAGTTGCAGGAAGATGCAACCATTGTTCTGCCACGAGGCATCACAAACATGGCCATAGAAATAAAAAATGGAGAGTTCTGCTGGGACCCTACTTCTTCAAAGCTGACATTATCGGGAATACAAATGAAAGTGGAGAGGGGGAGGCGTGTGGCTGTATGTGGAATGGTTGGTTCTGGGAAATCGAGCTTTCTCTCTTGTATCCTCGGAGAGATTCCGAAAATCTCTGGTGAAGTTAGAATATGTGGTTCTGCTGCTTATGTCTCTCAGTCAGCTTGGATACAGTCTGGAAATATTGAAGAAAATATCCTTTTTGGCAGCCCAATGGATAGGGCAAAGTACAAGAAAGTTCTCCATGCTTGTTCACTGAAGAAGGATTTGGAACTATTCTCGCATGGAGATCAAACCATTATTGGTGACAGAGGCATAAATTTGAGTGGTGGCCAGAAGCAACGAGTGCAGCTTGCAAGGGCACTCTATCAAGATGCGGATATTTATTTACTTGATGATCCCTTCAGTGCTGTCGATGCACACACTGGTTCGGAATTATTTAAGGAGTACATAATGACTGCACTAGCTACTAAGACTGTGATTTTTGTGACCCACCAAGTTGAATTTCTGCCAGCTGCTGATATGATACTGGTTCTCAAGGGAGGGCATATCATCCAAGCAGGAAAATATGATGATCTTTTACAAGCTGGAACTGATTTTAAAACTTTAGTCTCAGCTCATCATGAAGCAATTGAAGCTATGGATATTCCCAGTCACTCATCTGAGGATTCAGATGAAATTATGCCTCCTAATGGATCTGTTGTGTTAAAATGTGACACACAGGCAAATAATATTGAAAATTTAGCAAAGGAAGTGCAAGAGGGTGTATCAACTTCAGACCAAAAAGCAATTAAGGAAAAAAAGAAAGCAAAACGTGCAAGGAAAAAGCAGCTTGTTCAGGAAGAGGAAAGAGAAAGGGGAAGGGTCAGCATGAAGATCTATTTGTCATATATGGCTGCAGCATATAAAGGCCTATTGATCCCACTGATTATCCTTGCACAGGCTCTGTTTCAGGTGCTTCAAATAGCTAGTAATTGGTGGATGGCTTGGGCAAATCCACAAACTGAAGGCGGGCTACCGAAGACAAGTCCTATGGTCCTTCTCGGTGTTTTTATGGCCCTTGCTTTTGGGAGCTCTTGTTTCATATTTGTTAGGGCTGTTCTGGTTGCCACATTTGGTCTAGAAGCTGCGCAGAAATTGTTTGTAAAGATGCTTAGAAGTGTGTTTCGAGCACCAATGTCTTTCTTTGACTCTACTCCAGCTGGACGTATACTGAATCGTGTGTCTATTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGTGGGTTTGCTTCGACGACTATACAGCTTCTTGGTATTGTTGGTGTAATGACAAAAGTTACCTGGCAAGTTTTACTCCTTGTCATTCCAATGGCCATTGCTTGCTTGTGGATGCAGAAATATTACATGGCTTCATCAAGGGAACTGGTTCGTATTGTTAGCATCCAGAAATCTCCAGTTATCCATCTTTTTGGTGAATCAATTGCTGGGGCAGCCACAATTAGAGGATTTGGACAGGAGAAGAGGTTCATGAAGAGGAATCTTTATCTTCTCGATTGCTTTGGTCGCCCCTTCTTCTATAGTCTTGCTGCTATTGAATGGCTCTGCCTGCGCATGGAGTTACTCTCAACCTTCGTGTTTGCCTTTTGCATGATTTTGCTAGTGAGCTTCCCACATGGAAGTATTGACCCAAGCATGGCAGGCCTTGCTGTTACTTATGGCCTTAATTTGAATGCTCGACTATCACGGTGGATACTTAGTTTCTGCAAGCTTGAAAACAAAATTATTTCCATTGAAAGGATTCACCAATACAGCCAAATCCCAGGAGAAGCTCCACCGATCATTGAGAACTCTCGCCCTCCATCCTCGTGGCCAGAGAATGGAACAATTGAACTGATTGATCTAAAGGTCCGCTACAAGGAAAGTCTTCCTGTTGTGCTTCATAGTGTAACCTGCAAATTTCCTGGTGGTAATAAAATTGGAATTGTTGGGCGTACTGGAAGTGGTAAATCGACTTTGATCCAGGCGCTATTCCGAATGATTGAACCAGCAGGTGGGAAGATCATAATTGACAACATTGATATTTCAACAATTGGCCTTCATGACATTCGTAGCCGTCTGAGTATAATACCTCAAGATCCTACCTTGCTTGAAGGGACAATTAGAGGCAATCTTGATCCTCTTGAAGAGCACTCAGACCAGGAAATTTGGCAGGCACTTGATAAGTCTCAGCTTGGGGATGTAATCCGCCAAAAAGAGCAAAAGCTTGATACGCCAGTGCTCGAGAATGGAGATAATTGGAGTGTTGGGCAAAGGCAACTGGTTTCCCTGGGCCAGGCTTTGCTTAAACAGGCAAGAATTTTGGTGCTTGATGAAGCGACTGCTTCAGTTGATACAGCCACAGATAATCTTATCCAGAAGATTATCCGAACTGAATTCCAGAACTGCACTGTATGCACTATTGCGCATCGGATCCCAACCGTTATCGATAGCGATCTTGTTCTGGTCCTCAGTGATGGTCGAGTTGCAGAGTTTGATACGCCAGCACGACTATTAGAGGACAAATCATCCATGTTCCTGAAGTTGGTCACCGAGTACTCATCCAGGTCAAGTGGCATTCCAGATTTTTGA 4599 0.434 MGIVLLLSKFISSSSLTSSSHTLLRAINGLPILELSSICINLTLFLVFLFIVSARQFFVCIGRVRIIKDDSGANSNPIRRSIDREIRDIEIGKGFIATVSCCFYVLLLQVLVLATDGIGLIRGALIGKTANWSLLCLPAAQFLAWFVLSVSALHCKFKVSEKFPLLLRVWWFVSFIIWLCSVYVDAKGFFREGLNHVSAHVLANFAASPALAFLFFVAIRGVTGIQVRRNSDLQEPLLPEEEAGCLKVTPYSEAGLFSLVTLSWLNPLLSVGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKAENTSKQPSLAWAILKSFWREAACNAVFAGLNTLVSYVGPYMISYFVDYLGGNETFPHEGYILAGIFFSAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATFIATIISIVVTVPLAKLQEDYQDKLMAAKDDRMRKTSECLRNMRILKLHAWEDRYRMKLEEMRHVEFHWLRKALYSQAFVTFIFWSSPIFVAAITFGTSILLGTQLTAGGVLSALATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGITNMAIEIKNGEFCWDPTSSKLTLSGIQMKVERGRRVAVCGMVGSGKSSFLSCILGEIPKISGEVRICGSAAYVSQSAWIQSGNIEENILFGSPMDRAKYKKVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALATKTVIFVTHQVEFLPAADMILVLKGGHIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPSHSSEDSDEIMPPNGSVVLKCDTQANNIENLAKEVQEGVSTSDQKAIKEKKKAKRARKKQLVQEEERERGRVSMKIYLSYMAAAYKGLLIPLIILAQALFQVLQIASNWWMAWANPQTEGGLPKTSPMVLLGVFMALAFGSSCFIFVRAVLVATFGLEAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLLGIVGVMTKVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPVIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFGRPFFYSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIHQYSQIPGEAPPIIENSRPPSSWPENGTIELIDLKVRYKESLPVVLHSVTCKFPGGNKIGIVGRTGSGKSTLIQALFRMIEPAGGKIIIDNIDISTIGLHDIRSRLSIIPQDPTLLEGTIRGNLDPLEEHSDQEIWQALDKSQLGDVIRQKEQKLDTPVLENGDNWSVGQRQLVSLGQALLKQARILVLDEATASVDTATDNLIQKIIRTEFQNCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSSRSSGIPDF* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g0733 1532 FunFam ABC transporter C family member 10 312 625 - -
Vvi7g0733 1532 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524|GO:0016887
Vvi7g0733 1532 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 332 609 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0733 1532 FunFam ABC transporter C family member 3 1269 1521 - -
Vvi7g0733 1532 Pfam ABC transporter transmembrane region 970 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0733 1532 Pfam ABC transporter transmembrane region 333 597 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0733 1532 Coils Coil 921 945 - -
Vvi7g0733 1532 Gene3D ABC transporter type 1, transmembrane domain 928 1266 IPR036640 GO:0005524|GO:0016020
Vvi7g0733 1532 Gene3D ABC transporter type 1, transmembrane domain 295 626 IPR036640 GO:0005524|GO:0016020
Vvi7g0733 1532 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 969 1239 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi7g0733 1532 CDD ABCC_MRP_domain2 1284 1504 - -
Vvi7g0733 1532 Coils Coil 288 308 - -
Vvi7g0733 1532 Pfam ABC transporter 1303 1451 IPR003439 GO:0005524
Vvi7g0733 1532 SMART AAA_5 1312 1497 IPR003593 GO:0016887
Vvi7g0733 1532 SMART AAA_5 670 851 IPR003593 GO:0016887
Vvi7g0733 1532 CDD ABCC_MRP_domain1 643 842 - -
Vvi7g0733 1532 FunFam ABC transporter C family member 5 628 875 - -
Vvi7g0733 1532 Gene3D - 637 871 IPR027417 -
Vvi7g0733 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 865 IPR027417 -
Vvi7g0733 1532 FunFam ABC transporter C family member 5 930 1267 - -
Vvi7g0733 1532 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 251 1523 - -
Vvi7g0733 1532 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
Vvi7g0733 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1277 1516 IPR027417 -
Vvi7g0733 1532 SUPERFAMILY ABC transporter transmembrane region 966 1269 IPR036640 GO:0005524|GO:0016020
Vvi7g0733 1532 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1286 1520 IPR003439 GO:0005524
Vvi7g0733 1532 Pfam ABC transporter 661 795 IPR003439 GO:0005524
Vvi7g0733 1532 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Vvi7g0733 1532 Gene3D - 1270 1522 IPR027417 -
Vvi7g0733 1532 CDD ABC_6TM_ABCC_D2 967 1261 IPR044726 GO:0140359
Vvi7g0733 1532 SUPERFAMILY ABC transporter transmembrane region 318 625 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g0733 Vvi-Chr7 7535627 7546064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g0733 643 859 Calmodulin-binding Proteins AT2G36910 30.043 4.83e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g0733 - - vvi:100258320 2927.12